RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PANX1Q96RD7 426 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 ACBD6Q9BR61 282 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 RTN4RQ9BZR6 473 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SLC6A15Q9H2J7 730 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 NELFAQ9H3P2 528 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 C12orf4Q9NQ89 552 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 RIC8BQ9NVN3 520 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SOX13Q9UN79 622 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 U3KQV3 271 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PREX2Q70Z35 1606 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SAMD9LQ8IVG5 1584 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 GPATCH8Q9UKJ3 1502 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 ANKRD61A6NGH8 418 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 GOLGA6L10A6NI86 522 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 C12orf71A8MTZ7 269 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FAM171A2A8MVW0 826 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 KIF28PB7ZC32 967 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 GUCY1B2O75343 617 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 DNAJB5O75953 348 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CXCL14O95715 111 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 ZNF888P0CJ79 500 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 EGR1P18146 543 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FSHRP23945 695 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 CYP2F1P24903 491 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 BSGP35613 385 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 THOP1P52888 689 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 P2RX3P56373 397 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 LGALS4P56470 323 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SELENOVP59797 346 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 AMPD2Q01433 879 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SCRN1Q12765 414 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 E2F2Q14209 437 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PARP6Q2NL67 630 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 ANO7Q6IWH7 933 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 MIGA2Q7L4E1 593 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FAM228AQ86W67 206 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 NRROSQ86YC3 692 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PHYKPLQ8IUZ5 450 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 DTWD2Q8NBA8 298 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TP53I13Q8NBR0 393 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 LEMD2Q8NC56 503 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 OR13H1Q8NG92 308 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 RAB3IL1Q8TBN0 382 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 LARP4BQ92615 738 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TMEM186Q96B77 213 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 RHBDF1Q96CC6 855 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 ZFYVE19Q96K21 471 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TRIB1Q96RU8 372 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PARK7Q99497 189 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 FERMT1Q9BQL6 677 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 BPIFA3Q9BQP9 254 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 WDR83Q9BRX9 315 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 CCM2Q9BSQ5 444 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 FBXO44Q9H4M3 255 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 SMURF2Q9HAU4 748 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 PDP1Q9P0J1 537 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 DNAJB4Q9UDY4 337 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 TRMT6Q9UJA5 497 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 TRPC5Q9UL62 973 aaPredicted RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 HBS1LQ9Y450 684 aaKnown RBP4.78□□□□□ -1.64
SMG1-207ENST00000563235 SAMM50Q9Y512 469 aa4.78□□□□□ -1.64
SMG1-207ENST00000563235 MARF1Q9Y4F3 1742 aaKnown RBP4.77□□□□□ -1.65
SMG1-207ENST00000563235 CDC42BPBQ9Y5S2 1711 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 PFASO15067 1338 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A20PA6NIJ5 464 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 LRRC53A6NM62 1247 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 SNAP23O00161 211 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 HIP1O00291 1037 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 PEX12O00623 359 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 XPO1O14980 1071 aaKnown RBP4.77□□□□□ -1.65
SMG1-207ENST00000563235 ATP8B1O43520 1251 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 RPS6KA5O75582 802 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 KRT6BP04259 564 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 ERCC2P18074 760 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 GABRB1P18505 474 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 KRT15P19012 456 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 PTNP21246 168 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 CD1BP29016 333 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 GJA4P35212 333 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 GCKP35557 465 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 KRT6CP48668 564 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 CASP4P49662 377 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 ARFIP2P53365 341 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 MFAP4P55083 255 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 ST8SIA6P61647 398 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 SH3BP2P78314 561 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 DHX9Q08211 1270 aaKnown RBP4.77□□□□□ -1.65
SMG1-207ENST00000563235 CLN3Q13286 438 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 CAMK1Q14012 370 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 GRM4Q14833 912 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 FAM83EQ2M2I3 478 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 KHDC1LQ5JSQ8 128 aa4.77□□□□□ -1.65
SMG1-207ENST00000563235 ARMC12Q5T9G4 340 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms