RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	SLC13A4	Q9UKG4	626 aa		3.38	□□□□□ -1.87
SLTM-223	ENST00000560532	RALY	Q9UKM9	306 aa	Known RBP	3.38	□□□□□ -1.87
SLTM-223	ENST00000560532	KCNK7	Q9Y2U2	307 aa		3.38	□□□□□ -1.87
SLTM-223	ENST00000560532	STON1	Q9Y6Q2	735 aa		3.38	□□□□□ -1.87
SLTM-223	ENST00000560532	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	PMS2P5	A8MQ11	134 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	RFPL2	O75678	378 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	MTA2	O94776	668 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	F9	P00740	461 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	TF	P02787	698 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	PYGL	P06737	847 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	HLA-DOB	P13765	273 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	CD58	P19256	250 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SHMT1	P34896	483 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	TUB	P50607	506 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	RPP30	P78346	268 aa	Known RBP	3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	PPIG	Q13427	754 aa	Known RBP eCLIP	3.37	□□□□□ -1.87	8e-7	■□□□□ 10.5
SLTM-223	ENST00000560532	VEPH1	Q14D04	833 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	HIST2H2AC	Q16777	129 aa	Predicted RBP	3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SLC9B1	Q4ZJI4	515 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SPINK14	Q6IE38	97 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	B3GNT6	Q6ZMB0	384 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	LINGO2	Q7L985	606 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	FOXRED2	Q8IWF2	684 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SMAP1	Q8IYB5	467 aa	Predicted RBP	3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SCCPDH	Q8NBX0	429 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	BEST2	Q8NFU1	509 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	BBS10	Q8TAM1	723 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	ZNF414	Q96IQ9	312 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	KLHL15	Q96M94	604 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SIN3A	Q96ST3	1273 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	HAUS8	Q9BT25	410 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	KCNN2	Q9H2S1	579 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	MAGEE1	Q9HCI5	957 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	C1RL	Q9NZP8	487 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	MPP6	Q9NZW5	540 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	PGAP2	Q9UHJ9	254 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	FAM96B	Q9Y3D0	163 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	LSM4	Q9Y4Z0	139 aa	Known RBP	3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	CYP46A1	Q9Y6A2	500 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	SCIN	Q9Y6U3	715 aa		3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	PDS5A	Q29RF7	1337 aa	Known RBP	3.37	□□□□□ -1.87
SLTM-223	ENST00000560532	TEX13C	A0A0J9YWL9	993 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	BCAT2	O15382	392 aa	Predicted RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	TNFSF14	O43557	240 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	PLRG1	O43660	514 aa	Known RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	CD53	P19397	219 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	GABRB2	P47870	512 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ITGAD	Q13349	1161 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	NEDD9	Q14511	834 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ZNF239	Q16600	458 aa	Known RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	TCTN1	Q2MV58	587 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	MMEL1	Q495T6	779 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ARHGAP17	Q68EM7	881 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	CPLX2	Q6PUV4	134 aa	Known RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	RRM2B	Q7LG56	351 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	CHERP	Q8IWX8	916 aa	Known RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ESX1	Q8N693	406 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ADAD2	Q8NCV1	583 aa	Known RBP	3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ST8SIA4	Q92187	359 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	RND1	Q92730	232 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	RNF125	Q96EQ8	232 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	ZNF583	Q96ND8	569 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	BBS4	Q96RK4	519 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	PSMD1	Q99460	953 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	MPHOSPH8	Q99549	860 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	KXD1	Q9BQD3	176 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	AGXT2	Q9BYV1	514 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	UBXN6	Q9BZV1	441 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	TKTL2	Q9H0I9	626 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	BRF2	Q9HAW0	419 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	KLHL1	Q9NR64	748 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	KCND2	Q9NZV8	630 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	TINAG	Q9UJW2	476 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532	A4GNT	Q9UNA3	340 aa		3.36	□□□□□ -1.87
SLTM-223	ENST00000560532		A0A1B0GVC2	190 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	TMEM202	A6NGA9	273 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	TSPAN4	O14817	238 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	HOXB5	P09067	269 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	IRF1	P10914	325 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	MAOA	P21397	527 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	ABCD3	P28288	659 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	RAD23B	P54727	409 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	PPP2R5B	Q15173	497 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	C2orf68	Q2NKX9	166 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	ZNF876P	Q49A33	203 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	INO80C	Q6PI98	192 aa	Predicted RBP	3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	TDRP	Q86YL5	185 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	ZBTB2	Q8N680	514 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	CADM4	Q8NFZ8	388 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	HUS1B	Q8NHY5	278 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	NFKBID	Q8NI38	313 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	SLC20A1	Q8WUM9	679 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	LGALS12	Q96DT0	336 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	SLC41A2	Q96JW4	573 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	ZNF570	Q96NI8	536 aa		3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	NR1H4	Q96RI1	486 aa	Predicted RBP	3.35	□□□□□ -1.87
SLTM-223	ENST00000560532	FAM110A	Q9BQ89	295 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms