RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 GALNT3Q14435 633 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 QPCTQ16769 361 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 C14orf28Q4W4Y0 310 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 SLC9A4Q6AI14 798 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 SLC30A9Q6PML9 568 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 MFSD7Q6UXD7 560 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 MARK2Q7KZI7 788 aaKnown RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 KDELC2Q7Z4H8 507 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 CCNJLQ8IV13 435 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 AP2M1Q96CW1 435 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 CCDC42Q96M95 316 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 ZNF578Q96N58 590 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 FCRL3Q96P31 734 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 GFM1Q96RP9 751 aaKnown RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 PCDH9Q9HC56 1237 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 TAAR2Q9P1P5 351 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 LRIT1Q9P2V4 623 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 SAE1Q9UBE0 346 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-205ENST00000559898 SLC17A4Q9Y2C5 497 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 PRKAB1Q9Y478 270 aa17.67■□□□□ 0.42
HDDC3-205ENST00000559898 CAPN8A6NHC0 703 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 CDRT15L2A8MXV6 281 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 PSMD11O00231 422 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 B4GAT1O43505 415 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 TNFSF15O95150 251 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 EML2O95834 649 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 COMTP21964 271 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 KELP23276 732 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 ADCY8P40145 1251 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 EPHB1P54762 984 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 PCBP4P57723 403 aaKnown RBP17.66■□□□□ 0.42
HDDC3-205ENST00000559898 OR1D5P58170 312 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 B4GALNT1Q00973 533 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 DPTQ07507 201 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 SRSF6Q13247 344 aaKnown RBP17.66■□□□□ 0.42
HDDC3-205ENST00000559898 PCSK4Q6UW60 755 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 SPRED1Q7Z699 444 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 MAP7D3Q8IWC1 876 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 TC2NQ8N9U0 490 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 FATE1Q969F0 183 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 ARFGAP3Q9NP61 516 aa17.66■□□□□ 0.42
HDDC3-205ENST00000559898 ZNHIT6Q9NWK9 470 aaKnown RBP17.66■□□□□ 0.42
HDDC3-205ENST00000559898 CNOT6Q9ULM6 557 aaKnown RBP17.66■□□□□ 0.42
HDDC3-205ENST00000559898 TRBV23OR9-2A0A075B6M9 112 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 FADS2P1A8MWK0 482 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ECEL1O95672 775 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ATP1A1P05023 1023 aaKnown RBP17.65■□□□□ 0.42
HDDC3-205ENST00000559898 KRT10P13645 584 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ITIH1P19827 911 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ETV5P41161 510 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 MARCKSL1P49006 195 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 CXADRP78310 365 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 AP1B1Q10567 949 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ZNF648Q5T619 568 aaPredicted RBP17.65■□□□□ 0.42
HDDC3-205ENST00000559898 C17orf82Q86X59 251 aaPredicted RBP17.65■□□□□ 0.42
HDDC3-205ENST00000559898 RFX6Q8HWS3 928 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 NAGSQ8N159 534 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ZNF248Q8NDW4 579 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 SPATA22Q8NHS9 363 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 WDR36Q8NI36 951 aaKnown RBP17.65■□□□□ 0.42
HDDC3-205ENST00000559898 ZDHHC1Q8WTX9 485 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 OLFM3Q96PB7 478 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 SEMA6CQ9H3T2 930 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 RDH14Q9HBH5 336 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 SEPT10Q9P0V9 454 aa17.65■□□□□ 0.42
HDDC3-205ENST00000559898 CCDC187A0A096LP49 1063 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 AKR1B15C9JRZ8 316 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-205ENST00000559898 APOL1O14791 398 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 IVLP07476 585 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 GLB1P16278 677 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 PECAM1P16284 738 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-205ENST00000559898 UGT1A5P35504 534 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 ERVPABLB-1P60509 514 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 IFI35P80217 286 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-205ENST00000559898 ADAMTSL4Q6UY14 1074 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 LYSMD3Q7Z3D4 306 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 ARL14Q8N4G2 192 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 SCARF2Q96GP6 870 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-205ENST00000559898 COX14Q96I36 57 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 AGAP3Q96P47 875 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 TRIB3Q96RU7 358 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 APPL1Q9UKG1 709 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 PCDHGA8Q9Y5G5 932 aa17.64■□□□□ 0.41
HDDC3-205ENST00000559898 ATMQ13315 3056 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 C1orf232A0A0U1RR37 186 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 F5H423 210 aaPredicted RBP17.63■□□□□ 0.41
HDDC3-205ENST00000559898 PPM1DO15297 605 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 KLK10O43240 276 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 MT-CYBP00156 380 aaPredicted RBP17.63■□□□□ 0.41
HDDC3-205ENST00000559898 MX2P20592 715 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 TEAD1P28347 426 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 ARHGAP25P42331 645 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 INHBCP55103 352 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 CFHR1Q03591 330 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 NOMO1Q15155 1222 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 PCSK7Q16549 785 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 AMZ1Q400G9 498 aa17.63■□□□□ 0.41
HDDC3-205ENST00000559898 PYCR3Q53H96 274 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms