RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 GPR63Q9BZJ6 419 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 TCEAL2Q9H3H9 227 aaPredicted RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 L2HGDHQ9H9P8 463 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 ARFGAP3Q9NP61 516 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 IL26Q9NPH9 171 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 AASDHPPTQ9NRN7 309 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 SYBUQ9NX95 663 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 NCDNQ9UBB6 729 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 ASIC3Q9UHC3 531 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 FNDC3AQ9Y2H6 1198 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 SNX24Q9Y343 169 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 OAS3Q9Y6K5 1087 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 ESYT3A0FGR9 886 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 MROH6A6NGR9 719 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 OR51F1A6NGY5 319 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 TLR4O00206 839 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 CDX4O14627 284 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 SCAMP1O15126 338 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 GFRA3O60609 400 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 SEC31AO94979 1220 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 ZNF806P0C7X5 589 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 ENGP17813 658 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PSMA3P25788 255 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 AKT2P31751 481 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 HOXD12P35452 270 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 TRIM23P36406 574 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 POLD2P49005 469 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 CDKN1CP49918 316 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 AFF3P51826 1226 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 SESN2P58004 480 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 DPTQ07507 201 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 CDH17Q12864 832 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PEX6Q13608 980 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PDE1CQ14123 709 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 DHX34Q14147 1143 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 TAF1AQ15573 450 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 SMAD1Q15797 465 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 CHRNA6Q15825 494 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 CSRP2Q16527 193 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 DUOXA1Q1HG43 343 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 ZNF542PQ5EBM4 170 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 FNBP1LQ5T0N5 605 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 DUPD1Q68J44 220 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 HIBCHQ6NVY1 386 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 PNCKQ6P2M8 343 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 CES3Q6UWW8 571 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 ZDHHC24Q6UX98 284 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PPP1R21Q6ZMI0 780 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PTAR1Q7Z6K3 402 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 HEATR4Q86WZ0 1026 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 IGDCC3Q8IVU1 814 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 MFSD2AQ8NA29 543 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 OR4K2Q8NGD2 314 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 OR13J1Q8NGT2 312 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 BRSK1Q8TDC3 778 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 GRK7Q8WTQ7 553 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 AP2M1Q96CW1 435 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 SERPINB12Q96P63 405 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 PPP1R2P1Q96PQ5 205 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 TEX101Q9BY14 249 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 DPH5Q9H2P9 285 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 SUDS3Q9H7L9 328 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 FGF22Q9HCT0 170 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM1-217ENST00000559108 NFKBIL1Q9UBC1 381 aaPredicted RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 DMGDHQ9UI17 866 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 GMEB2Q9UKD1 530 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 ANKRD6Q9Y2G4 727 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 HS3ST3A1Q9Y663 406 aa10.85□□□□□ -0.67
TPM1-217ENST00000559108 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
TPM1-217ENST00000559108 ARID1BQ8NFD5 2236 aaPredicted RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 A6NNZ2 444 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 INPP4BO15327 924 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 PSMD3O43242 534 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A9O60656 530 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 TUBB4AP04350 444 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 CELA2BP08218 269 aaPredicted RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A6P19224 532 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 LPOP22079 712 aaPredicted RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A1P22309 533 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A4P22310 534 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ARNTP27540 789 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 NMBRP28336 390 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A3P35503 534 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A5P35504 534 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ACTN2P35609 894 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ADCY8P40145 1251 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 LMAN1P49257 510 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ITGA8P53708 1063 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 DCDC1P59894 354 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 CDK3Q00526 305 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 IL9RQ01113 521 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 CKAP4Q07065 602 aaKnown RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 SEPT6Q14141 434 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 STAT4Q14765 748 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms