RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 AGAP3Q96P47 875 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ANP32EQ9BTT0 268 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 GSDMCQ9BYG8 508 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 LRRN3Q9H3W5 708 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ASCL3Q9NQ33 180 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 THSD1Q9NS62 852 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 SPATS2LQ9NUQ6 558 aaKnown RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 ATXN7L1Q9ULK2 861 aaPredicted RBP11.88□□□□□ -0.51
HERC1-202ENST00000558324 RNF215Q9Y6U7 377 aa11.88□□□□□ -0.51
HERC1-202ENST00000558324 ACACAQ13085 2346 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 DSPP15924 2871 aaKnown RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 PPP1R12AO14974 1030 aaPredicted RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 ASMTLO95671 621 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 MMP2P08253 660 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 GLB1P16278 677 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 MAGEA1P43355 309 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 SKOR1P84550 965 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 CTBSQ01459 385 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 TLE3Q04726 772 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 DPTQ07507 201 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 BIRC2Q13490 618 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 HLTFQ14527 1009 aaKnown RBP eCLIP11.87□□□□□ -0.51
HERC1-202ENST00000558324 PDK1Q15118 436 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 PCSK7Q16549 785 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 QPCTQ16769 361 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 LRRC38Q5VT99 294 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 KAZNQ674X7 775 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 OGFOD3Q6PK18 319 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 SARM1Q6SZW1 724 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 ADAMTSL4Q6UY14 1074 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 SPRED1Q7Z699 444 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 NRROSQ86YC3 692 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 ZNF248Q8NDW4 579 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 OR6C4Q8NGE1 309 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 GPBAR1Q8TDU6 330 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 ZDHHC1Q8WTX9 485 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 KCNE4Q8WWG9 221 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 FCRL3Q96P31 734 aaPredicted RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 OLFM3Q96PB7 478 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 BRD8Q9H0E9 1235 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 WDR70Q9NW82 654 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 TAAR2Q9P1P5 351 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 LRIT1Q9P2V4 623 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 SAE1Q9UBE0 346 aaPredicted RBP11.87□□□□□ -0.51
HERC1-202ENST00000558324 INTUQ9ULD6 942 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 SLC17A4Q9Y2C5 497 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 FAM208BQ5VWN6 2430 aa11.87□□□□□ -0.51
HERC1-202ENST00000558324 ZFYVE26Q68DK2 2539 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 CCDC187A0A096LP49 1063 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ZNF487B1APH4 448 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 DXOO77932 396 aaKnown RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 TNFSF15O95150 251 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ATP1A1P05023 1023 aaKnown RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 IVLP07476 585 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 PIRTP0C851 137 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 HGFP14210 728 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ZFXP17010 805 aaPredicted RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 TEAD1P28347 426 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ADCY8P40145 1251 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ACTR1BP42025 376 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 SLC1A1P43005 524 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 INHBCP55103 352 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ERVPABLB-1P60509 514 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ACTR1AP61163 376 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 RPL26P61254 145 aaKnown RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ZNF765Q7L2R6 523 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 LYSMD3Q7Z3D4 306 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 GRAMD1AQ96CP6 724 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 PRR11Q96HE9 360 aaPredicted RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 HIC2Q96JB3 615 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 SLC46A1Q96NT5 459 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 OR2M4Q96R27 311 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 MLPHQ9BV36 600 aaPredicted RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 ADGRE3Q9BY15 652 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 STRADBQ9C0K7 418 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 CDH19Q9H159 772 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 TRNAU1APQ9NX07 287 aaKnown RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 RPL26L1Q9UNX3 145 aaKnown RBP11.86□□□□□ -0.51
HERC1-202ENST00000558324 PRKAB1Q9Y478 270 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ST14Q9Y5Y6 855 aa11.86□□□□□ -0.51
HERC1-202ENST00000558324 ITPR1Q14643 2758 aa11.85□□□□□ -0.51
HERC1-202ENST00000558324 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
HERC1-202ENST00000558324 ASXL3Q9C0F0 2248 aa11.85□□□□□ -0.51
HERC1-202ENST00000558324 RHPN2P1A8MT19 583 aa11.85□□□□□ -0.51
HERC1-202ENST00000558324 FADS2P1A8MWK0 482 aa11.85□□□□□ -0.51
HERC1-202ENST00000558324 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
HERC1-202ENST00000558324 F5H423 210 aaPredicted RBP11.85□□□□□ -0.51
HERC1-202ENST00000558324 KLK10O43240 276 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms