RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ARHGAP22Q7Z5H3 698 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 GAS2L3Q86XJ1 694 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 MFN1Q8IWA4 741 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 TRIM48Q8IWZ4 208 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 TBC1D3Q8IZP1 549 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 ARL14Q8N4G2 192 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 GBP7Q8N8V2 638 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 ZNF557Q8N988 423 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 C12orf29Q8N999 325 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 KDM1BQ8NB78 822 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 XXYLT1Q8NBI6 393 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SPC24Q8NBT2 197 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 OR4C6Q8NH72 309 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 OR14C36Q8NHC7 312 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 HPS3Q969F9 1004 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 TTC17Q96AE7 1141 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 CYFIP2Q96F07 1278 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 CCNL2Q96S94 520 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 ZFYVE21Q9BQ24 234 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SPATA25Q9BR10 227 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 DUSP16Q9BY84 665 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 UBXN6Q9BZV1 441 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 DNAI2Q9GZS0 605 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SDCBP2Q9H190 292 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 OSBPL2Q9H1P3 480 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SMYD3Q9H7B4 428 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 PCDH18Q9HCL0 1135 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 ABCB8Q9NUT2 735 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 KLHL11Q9NVR0 708 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 PSD3Q9NYI0 1048 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SEPT10Q9P0V9 454 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SERGEFQ9UGK8 458 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 SFMBT1Q9UHJ3 866 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 LCMT1Q9UIC8 334 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 MCM8Q9UJA3 840 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 GGA2Q9UJY4 613 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 STOML2Q9UJZ1 356 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 CROTQ9UKG9 612 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 CFAP45Q9UL16 551 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 PCDHGA8Q9Y5G5 932 aa4.99□□□□□ -1.61
ATXN3-247ENST00000557311 HELZP42694 1942 aaKnown RBP4.99□□□□□ -1.61
ATXN3-247ENST00000557311 MYO18AQ92614 2054 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 KIAA1549LQ6ZVL6 1849 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 GOLGA6L10A0A0M3HER8 536 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 TCRBV5S2A0A599 114 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 NEMP2A6NFY4 417 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CDRT15L2A8MXV6 281 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 FAM25EA8MYX2 175 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 EIF3CLB5ME19 914 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PRAMEF26H0Y7S4 382 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PDLIM1O00151 329 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 FFAR3O14843 346 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 TGFB1I1O43294 461 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 LATO43561 262 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 SDC3O75056 442 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 LATS1O95835 1130 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 C4BPAP04003 597 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ASLP04424 464 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ALPPL2P10696 532 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MYF5P13349 255 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 KRT15P19012 456 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CR2P20023 1033 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 C5AR1P21730 350 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 DGKAP23743 735 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 HOXD13P35453 343 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PAK1Q13153 545 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CNGA3Q16281 694 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CLPPQ16740 277 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MUM1Q2TAK8 710 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ZSCAN23Q3MJ62 389 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MPP7Q5T2T1 576 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 FOXB2Q5VYV0 432 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ARMC3Q5W041 872 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ZC3H3Q8IXZ2 948 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 Q8N1Y9 231 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CCDC150Q8NCX0 1101 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 NEK11Q8NG66 645 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MAPK15Q8TD08 544 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PTPRN2Q92932 1015 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 SGF29Q96ES7 293 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PRR11Q96HE9 360 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 APOLD1Q96LR9 279 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CLIC6Q96NY7 704 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 EIF3CQ99613 913 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 GORASP1Q9BQQ3 440 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 TSGA10Q9BZW7 698 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CCDC68Q9H2F9 335 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms