RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GORASP1Q9BQQ3 440 aa22.79■■□□□ 1.24
TDP1-216ENST00000556867 ZFYVE1Q9HBF4 777 aa22.79■■□□□ 1.24
TDP1-216ENST00000556867 GOLGA6AQ9NYA3 693 aa22.79■■□□□ 1.24
TDP1-216ENST00000556867 PKD2L2Q9NZM6 624 aa22.79■■□□□ 1.24
TDP1-216ENST00000556867 CEP295Q9C0D2 2601 aa22.79■■□□□ 1.24
TDP1-216ENST00000556867 SCN8AQ9UQD0 1980 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 C5orf60A6NFR6 353 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 LMO7DNF2Z398 122 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 GCATO75600 419 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 PIRTP0C851 137 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 CKMT2P17540 419 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 TNNT3P45378 269 aaPredicted RBP22.78■■□□□ 1.24
TDP1-216ENST00000556867 GPR1P46091 355 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 GEMP55040 296 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 DNAJC3Q13217 504 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 SLC13A5Q86YT5 568 aaPredicted RBP22.78■■□□□ 1.24
TDP1-216ENST00000556867 FAM181AQ8N9Y4 354 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 IPMKQ8NFU5 416 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 CCDC110Q8TBZ0 833 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 EID2BQ96D98 161 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 WDR24Q96S15 920 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 RIOK2Q9BVS4 552 aaKnown RBP22.78■■□□□ 1.24
TDP1-216ENST00000556867 TLR10Q9BXR5 811 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 FRMD8Q9BZ67 464 aaPredicted RBP22.78■■□□□ 1.24
TDP1-216ENST00000556867 CLPBQ9H078 707 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 KCNF1Q9H3M0 494 aa22.78■■□□□ 1.24
TDP1-216ENST00000556867 HYAL3O43820 417 aaPredicted RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 TOP3BO95985 862 aaKnown RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 TNFP01375 233 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 HLA-DPA1P20036 260 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 PSMB4P28070 264 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 C1orf61Q13536 156 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 ELOCQ15369 112 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 SLC1A5Q15758 541 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 SIRPB2Q5JXA9 342 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 HENMT1Q5T8I9 393 aaKnown RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 ZCCHC8Q6NZY4 707 aaKnown RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 RD3Q7Z3Z2 195 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 TMC3Q7Z5M5 1100 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 SDR16C5Q8N3Y7 309 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 CHCHD4Q8N4Q1 142 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 PPP1R2P1Q96PQ5 205 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 FSD1LQ9BXM9 530 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 FRMD8P1Q9BZ68 369 aaPredicted RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 FAM83DQ9H4H8 585 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 NFKBIL1Q9UBC1 381 aaPredicted RBP22.77■■□□□ 1.24
TDP1-216ENST00000556867 SHOC2Q9UQ13 582 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 SPO11Q9Y5K1 396 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 PTPRBP23467 1997 aa22.77■■□□□ 1.24
TDP1-216ENST00000556867 TPRP12270 2363 aaKnown RBP22.76■■□□□ 1.23
TDP1-216ENST00000556867 PRSS38A1L453 326 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 FGF1P05230 155 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 ACP1P24666 158 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 CHRNA4P43681 627 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 DCDC1P59894 354 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 DEFB133Q30KQ1 61 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 KLHDC8BQ8IXV7 354 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 FAM71DQ8N9W8 422 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 APOLD1Q96LR9 279 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 AGAP2Q99490 1192 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 GPR63Q9BZJ6 419 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 CDH19Q9H159 772 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 TRABDQ9H4I3 376 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 MRPL40Q9NQ50 206 aaKnown RBP22.76■■□□□ 1.23
TDP1-216ENST00000556867 RAD18Q9NS91 495 aa22.76■■□□□ 1.23
TDP1-216ENST00000556867 AAR2Q9Y312 384 aaKnown RBP22.76■■□□□ 1.23
TDP1-216ENST00000556867 LY6G6EA0A0G2JKS1 128 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 RFPL3O75679 317 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CEACAM5P06731 702 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 ANXA6P08133 673 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CELA2BP08218 269 aaPredicted RBP22.75■■□□□ 1.23
TDP1-216ENST00000556867 CDK4P11802 303 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CKMT1AP12532 417 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CTSEP14091 401 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 DAB2P98082 770 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 ILKQ13418 452 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 PRPSAP1Q14558 356 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 SLC25A41Q8N5S1 370 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 ATG4AQ8WYN0 398 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 TMEM121Q9BTD3 319 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 SCNM1Q9BWG6 230 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CYP4F12Q9HCS2 524 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 HACD3Q9P035 362 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 SLC17A4Q9Y2C5 497 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 U3KQA8 63 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 CHD8Q9HCK8 2581 aa22.75■■□□□ 1.23
TDP1-216ENST00000556867 YY2O15391 372 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 LIASO43766 372 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 SLC4A1P02730 911 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 SPINK2P20155 84 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 ADRA1AP35348 466 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 C6orf132Q5T0Z8 1188 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 LVRNQ6Q4G3 990 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 RTP4Q96DX8 246 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 COX14Q96I36 57 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 HIC2Q96JB3 615 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 FICDQ9BVA6 458 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 BOCQ9BWV1 1114 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 EVA1BQ9NVM1 165 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 NCKIPSDQ9NZQ3 722 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms