RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 YWHAZP63104 245 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 RBP5P82980 135 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 OGDHQ02218 1023 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SLC18A2Q05940 514 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 AP1B1Q10567 949 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 DPYSL3Q14195 570 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KCNJ11Q14654 390 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TPSAB1Q15661 275 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CHI3L2Q15782 390 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TAZQ16635 292 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CDO1Q16878 200 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GOLGA7BQ2TAP0 167 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ATP13A4Q4VNC1 1196 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 BOLA3Q53S33 107 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 FNBP1LQ5T0N5 605 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM63BQ5T3F8 832 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 C1orf146Q5VVC0 180 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SNX30Q5VWJ9 437 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 FAM91A1Q658Y4 838 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CASC4Q6P4E1 433 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SLC30A9Q6PML9 568 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KYAT3Q6YP21 454 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 C4orf50Q6ZRC1 276 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TSHZ1Q6ZSZ6 1077 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KANSL1Q7Z3B3 1105 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PRPF39Q86UA1 669 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 RASSF3Q86WH2 238 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ARID3BQ8IVW6 561 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 UNC45BQ8IWX7 931 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 EMC1Q8N766 993 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GLIS1Q8NBF1 620 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SLC4A11Q8NBS3 891 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 JOSD2Q8TAC2 188 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TTC8Q8TAM2 541 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ACMSDQ8TDX5 336 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 AFG1LQ8WV93 481 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PRPF31Q8WWY3 499 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TRIB2Q92519 343 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PTCD3Q96EY7 689 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 MCRS1Q96EZ8 462 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 WDR92Q96MX6 357 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KLF6Q99612 283 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SH3GL3Q99963 347 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 NAT9Q9BTE0 207 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CCDC28BQ9BUN5 200 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TRIM4Q9C037 500 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 FAM192AQ9GZU8 254 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SDCBP2Q9H190 292 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CDT1Q9H211 546 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KCNH6Q9H252 994 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SMARCAD1Q9H4L7 1026 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PRDM12Q9H4Q4 367 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 Q9H521 79 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ASB7Q9H672 318 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 DENND2DQ9H6A0 471 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 SMYD3Q9H7B4 428 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ALG13Q9NP73 1137 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 ETNK2Q9NVF9 386 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 INTS7Q9NVH2 962 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 NMRK1Q9NWW6 199 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PDP2Q9P2J9 529 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 GRID1Q9ULK0 1009 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 APOBEC2Q9Y235 224 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 TTLL3Q9Y4R7 772 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 RIPK3Q9Y572 518 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 CFAP54Q96N23 3096 aa4.47□□□□□ -1.69
ATXN3-241ENST00000556374 PRRC2BQ5JSZ5 2229 aaKnown RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 KMT2BQ9UMN6 2715 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-241ENST00000556374 LCTP09848 1927 aa4.46□□□□□ -1.69
ATXN3-241ENST00000556374 XIRP2A4UGR9 3374 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PLXNA3P51805 1871 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 IGKV6D-21A0A0A0MT36 114 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 BCLAF3A2AJT9 711 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ARHGAP42A6NI28 874 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 C3orf70A6NLC5 250 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 E5RJQ4 531 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MDM4O15151 490 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 HBP1O60381 514 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 RAMP2O60895 175 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ENTPD5O75356 428 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 KRT36O76013 467 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TM7SF2O76062 418 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 BAG2O95816 211 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SLC25A27O95847 323 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SERPINA6P08185 405 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 HOXC6P09630 235 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 MYL4P12829 197 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 TCF4P15884 667 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PRKCHP24723 683 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 KIR2DL3P43628 341 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 NR2C2P49116 596 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 SERPINB8P50452 374 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 COPAP53621 1224 aa4.46□□□□□ -1.7
ATXN3-241ENST00000556374 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
ATXN3-241ENST00000556374 PDE1BQ01064 536 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms