RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CIB1Q99828 191 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SH3GL2Q99962 352 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC77Q9BR77 488 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZCCHC2Q9C0B9 1178 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GPR88Q9GZN0 384 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NUP62CLQ9H1M0 184 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 EPS8L2Q9H6S3 715 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PCDH18Q9HCL0 1135 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TREM1Q9NP99 234 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRMT7Q9NVM4 692 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 INTS13Q9NVM9 706 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 UCKL1Q9NWZ5 548 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLC39A1Q9NY26 324 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CDH22Q9UJ99 828 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TLK1Q9UKI8 766 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SMG5Q9UPR3 1016 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PSAT1Q9Y617 370 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NUMBLQ9Y6R0 609 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF292O60281 2723 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 A0A0C4DFX4 3053 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1B0GVL5 298 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1W2PQ09 198 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MEIS3P2A8K0S8 358 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 H3BQV1 296 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DNALI1O14645 258 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF197O14709 1029 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SCAMP2O15127 329 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LAMTOR5O43504 91 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MED7O43513 233 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PPP6R2O75170 966 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KLHL18O94889 574 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ALOX5P09917 674 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 UBTFL6P0CB48 400 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 STAG3L3P0CL85 134 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRKAR1AP10644 381 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ANPEPP15144 967 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KCNE1P15382 129 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TUBG1P23258 451 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 IL32P24001 234 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PSMA5P28066 241 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 EEF1DP29692 281 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GGT5P36269 586 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ETV5P41161 510 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RAP1GAPP47736 663 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SCTRP47872 440 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NME5P56597 212 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PHEXP78562 749 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF177Q13360 481 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SF3B4Q15427 424 aaKnown RBP eCLIP2.73□□□□□ -1.974e-6■■■□□ 16.1
PRPF39-206ENST00000554429 UAP1L1Q3KQV9 507 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 C2orf76Q3KRA6 126 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SPATS1Q496A3 300 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRRT3Q5FWE3 981 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TOR1AIP1Q5JTV8 583 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 C8orf74Q6P047 294 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TTC23LQ6PF05 361 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMC5Q6UXY8 1006 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CYP4V2Q6ZWL3 525 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM200AQ86VY9 491 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 STX12Q86Y82 276 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 C12orf56Q8IXR9 622 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 BLIDQ8IZY5 108 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CMTR1Q8N1G2 835 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DPP10Q8N608 796 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AOPEPQ8N6M6 819 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DNAAF3Q8N9W5 541 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC63Q8NA47 563 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SPATA4Q8NEY3 305 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GPR156Q8NFN8 814 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 OR52M1Q8NGK5 317 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TBCKQ8TEA7 893 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 OSCP1Q8WVF1 389 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 UBLCP1Q8WVY7 318 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KCNE4Q8WWG9 221 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRPF31Q8WWY3 499 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 THRSPQ92748 146 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HAS1Q92839 578 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LPPQ93052 612 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PHKBQ93100 1093 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FBXO32Q969P5 355 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SPDL1Q96EA4 605 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FAM120BQ96EK7 910 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PDLIM5Q96HC4 596 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PGBD1Q96JS3 809 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CNOT6LQ96LI5 555 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FER1L6-AS2Q96M78 137 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SECISBP2Q96T21 854 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LRRC3Q9BY71 257 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GPR63Q9BZJ6 419 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PITHD1Q9GZP4 211 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HSD3B7Q9H2F3 369 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RIBC2Q9H4K1 309 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLITRK6Q9H5Y7 841 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 WDR26Q9H7D7 661 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MINDY3Q9H8M7 445 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TUFT1Q9NNX1 390 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 C12orf4Q9NQ89 552 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms