RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 LYSMD3Q7Z3D4 306 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 GKN2Q86XP6 184 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 LRRC49Q8IUZ0 686 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 GPR156Q8NFN8 814 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 FATE1Q969F0 183 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 PRR11Q96HE9 360 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-206ENST00000553529 DEPDC7Q96QD5 511 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 TRIB3Q96RU7 358 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 SHOC2Q9UQ13 582 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 C1orf232A0A0U1RR37 186 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 AURKAO14965 403 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 CST8O60676 142 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 EML2O95834 649 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 RPLP0P05388 317 aaKnown RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 MX2P20592 715 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 PTPN3P26045 913 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 TAZQ16635 292 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 ALS2CLQ60I27 953 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 ZC3H18Q86VM9 953 aaKnown RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 HEMGNQ9BXL5 484 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 MAK16Q9BXY0 300 aaKnown RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 LACRTQ9GZZ8 138 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 DPEP2Q9H4A9 486 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 USP29Q9HBJ7 922 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 PHPT1Q9NRX4 125 aaPredicted RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 TRIM10Q9UDY6 481 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 INTUQ9ULD6 942 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 CNOT6Q9ULM6 557 aaKnown RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 SPO11Q9Y5K1 396 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 DSPP15924 2871 aaKnown RBP18.15■□□□□ 0.5
SHMT2-206ENST00000553529 SCN8AQ9UQD0 1980 aa18.15■□□□□ 0.5
SHMT2-206ENST00000553529 TRBV23OR9-2A0A075B6M9 112 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 PSMD11O00231 422 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 NTN3O00634 580 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 FGF1P05230 155 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 HOXC4P09017 264 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 CTBSQ01459 385 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 WASHC5Q12768 1159 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 PRKD1Q15139 912 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 LRRC38Q5VT99 294 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 PDZD3Q86UT5 571 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF761Q86XN6 746 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 IMP4Q96G21 291 aaKnown RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF830Q96NB3 372 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 BBC3Q96PG8 261 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-206ENST00000553529 ASCL3Q9NQ33 180 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 SLC17A4Q9Y2C5 497 aa18.14■□□□□ 0.49
SHMT2-206ENST00000553529 ARHGEF17Q96PE2 2063 aaPredicted RBP18.13■□□□□ 0.49
SHMT2-206ENST00000553529 CHD6Q8TD26 2715 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 LOC400499M0QZD8 3231 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 hCG_1818297A0A087WSY0 165 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 A0A087WV48 116 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 A0A1W2PQ67 120 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 TNFRSF10CO14798 259 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 PMPCBO75439 489 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 CA5AP35218 305 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 ADCY8P40145 1251 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 SLC1A1P43005 524 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 CHRNA4P43681 627 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 OLIG2Q13516 323 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHMT2-206ENST00000553529 TBC1D25Q3MII6 688 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 RBM44Q6ZP01 1051 aaKnown RBP18.13■□□□□ 0.49
SHMT2-206ENST00000553529 GPBAR1Q8TDU6 330 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 TADA1Q96BN2 335 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 TAAR2Q9P1P5 351 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 KNTC1P50748 2209 aa18.13■□□□□ 0.49
SHMT2-206ENST00000553529 URB1O60287 2271 aaKnown RBP18.12■□□□□ 0.49
SHMT2-206ENST00000553529 NBEAQ8NFP9 2946 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ITPR1Q14643 2758 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ZNF487B1APH4 448 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ANKRD66B4E2M5 251 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 GPR39O43194 453 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 NDUFA10O95299 355 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ECEL1O95672 775 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 NFKB1P19838 968 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 RPIAP49247 311 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 HADHBP55084 474 aaKnown RBP18.12■□□□□ 0.49
SHMT2-206ENST00000553529 DPTQ07507 201 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 SPIDRQ14159 915 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 PDK1Q15118 436 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 C14orf28Q4W4Y0 310 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 CERCAMQ5T4B2 595 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 OGFOD3Q6PK18 319 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 LVRNQ6Q4G3 990 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ADAMTSL4Q6UY14 1074 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 TMEM139Q8IV31 216 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 CCDC50Q8IVM0 306 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 NAGSQ8N159 534 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 CACTIN-AS1Q8N1I8 211 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 GPR26Q8NDV2 337 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 ATL2Q8NHH9 583 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 COX14Q96I36 57 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 GORASP1Q9BQQ3 440 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 DESI2Q9BSY9 194 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 RDH14Q9HBH5 336 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 GLOD4Q9HC38 313 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 EPB41L5Q9HCM4 733 aa18.12■□□□□ 0.49
SHMT2-206ENST00000553529 DDX56Q9NY93 547 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms