RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 SLCO1B7G3V0H7 640 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 FYNP06241 537 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ITGB6P18564 788 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TGM1P22735 817 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 RFC2P35250 354 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TPTEP56180 551 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 LAPTM5Q13571 262 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TXNDC11Q6PKC3 985 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 VASH1Q7L8A9 365 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 KIAA2013Q8IYS2 634 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ANKRD13AQ8IZ07 590 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ABI1Q8IZP0 508 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PIP4P2Q8N4L2 257 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PDPRQ8NCN5 879 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TRPV3Q8NET8 790 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 APPL2Q8NEU8 664 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 HASPINQ8TF76 798 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ZC3H15Q8WU90 426 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 EDEM1Q92611 657 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SDCCAG3Q96C92 435 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 EFHD1Q9BUP0 239 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SLC25A23Q9BV35 468 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TDRD1Q9BXT4 1180 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 KLHL25Q9H0H3 589 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 UPF3AQ9H1J1 476 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SMOC2Q9H3U7 446 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 NXF3Q9H4D5 531 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 EHD1Q9H4M9 534 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SMURF2Q9HAU4 748 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 INTS7Q9NVH2 962 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SCHIP1Q9P0W5 487 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ABCD2Q9UBJ2 740 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TMED5Q9Y3A6 229 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SLC30A1Q9Y6M5 507 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PRRC2BQ5JSZ5 2229 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ASB14A6NK59 587 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ZNF487B1APH4 448 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PSMD11O00231 422 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 EEF2KO00418 725 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TPD52L2O43399 206 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 KDM1AO60341 852 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 NOBOXO60393 691 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 RECQL4O94761 1208 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MYL3P08590 195 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 BMP4P12644 408 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 STMN1P16949 149 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 CRHBPP24387 322 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 HRH2P25021 359 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 NOS2P35228 1153 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 BMPR1AP36894 532 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 GSK3BP49841 420 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PRKAA2P54646 552 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 GP2P55259 537 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ATP6V0D1P61421 351 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 KIF19Q2TAC6 998 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TIGD2Q4W5G0 525 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 TECRLQ5HYJ1 363 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MFSD4BQ5TF39 518 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ZNF470Q6ECI4 717 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 DENND5AQ6IQ26 1287 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ZNF773Q6PK81 442 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 CRTC3Q6UUV7 619 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SCIMPQ6UWF3 145 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 C14orf80Q86SX3 495 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 RALGPS2Q86X27 583 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ERO1BQ86YB8 467 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SCAIQ8N9R8 606 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PTCD2Q8WV60 388 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MAGED4Q96JG8 741 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ALG9Q9H6U8 611 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MARCH7Q9H992 704 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 ITM2CQ9NQX7 267 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 WARS2Q9UGM6 360 aaKnown RBP4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PCDHGA11Q9Y5H2 935 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 SBF1O95248 1867 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 MCM3APO60318 1980 aa4.85□□□□□ -1.63
LIMA1-214ENST00000552783 PTGES3LE9PB15 166 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 DFFAO00273 331 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 GAS2O43903 313 aaKnown RBP4.84□□□□□ -1.63
LIMA1-214ENST00000552783 NPHS1O60500 1241 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 IPO13O94829 963 aaKnown RBP4.84□□□□□ -1.63
LIMA1-214ENST00000552783 SUPT7LO94864 414 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 SLC25A27O95847 323 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 LINC00032P0C843 101 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 PRKACGP22612 351 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 PSMA4P25789 261 aaKnown RBP4.84□□□□□ -1.63
LIMA1-214ENST00000552783 CASP2P42575 452 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 MATKP42679 507 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 ZFP36L2P47974 494 aaKnown RBP4.84□□□□□ -1.63
LIMA1-214ENST00000552783 GSSP48637 474 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 SLC12A2P55011 1212 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 TMBIM6P55061 237 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 MAP3K7CLP57077 242 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 OR4D2P58180 307 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 PLIN5Q00G26 463 aa4.84□□□□□ -1.63
LIMA1-214ENST00000552783 PPIL2Q13356 520 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms