RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TRIM8Q9BZR9 551 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 AKTIPQ9H8T0 292 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 MARCH2Q9P0N8 246 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 OPTCQ9UBM4 332 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 CPA4Q9UI42 421 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 MAGEL2Q9UJ55 1249 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 POLR3HQ9Y535 204 aaPredicted RBP10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 IPPQ9Y573 584 aa10.21□□□□□ -0.78
SMARCC2-209ENST00000550164 NRCAMQ92823 1304 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 MAGEB3O15480 346 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 RGS14O43566 566 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 FTH1P02794 183 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 EDN1P05305 212 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 ITGALP20701 1170 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 CLCQ05315 142 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TARBP2Q15633 366 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PAGE2Q7Z2X7 111 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 C2orf69Q8N8R5 385 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TXNDC5Q8NBS9 432 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 CLHC1Q8NHS4 586 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SNX27Q96L92 541 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PPP2R3BQ9Y5P8 575 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 DENRO43583 198 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 NTRK1P04629 796 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 ABCB1P08183 1280 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 DARSP14868 501 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 CCNCP24863 283 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SEPHS1P49903 392 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 RHOAP61586 193 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 MAD2L1Q13257 205 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TOP3AQ13472 1001 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TAF1CQ15572 869 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 RNF219Q5W0B1 726 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 FAM91A1Q658Y4 838 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TMEM132CQ8N3T6 1108 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 STYXQ8WUJ0 223 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TMIGD2Q96BF3 282 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 LINGO1Q96FE5 620 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SPATA17Q96L03 361 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PARK7Q99497 189 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 MLPHQ9BV36 600 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 ZYG11BQ9C0D3 744 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 IFT80Q9P2H3 777 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 VPS28Q9UK41 221 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 COL18A1P39060 1754 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 USP54Q70EL1 1684 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 NPEPPSL1A6NEC2 478 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SCAMP3O14828 347 aaKnown RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 POLD2P49005 469 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PSEN2P49810 448 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 TSTD2Q5T7W7 516 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 RRM2BQ7LG56 351 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PROSER1Q86XN7 944 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PRICKLE1Q96MT3 831 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SORT1Q99523 831 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 FBXO44Q9H4M3 255 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 SOX17Q9H6I2 414 aaPredicted RBP10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 RASSF1Q9NS23 344 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 PTCH2Q9Y6C5 1203 aa10.2□□□□□ -0.78
SMARCC2-209ENST00000550164 ADAMTS7Q9UKP4 1686 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 MYH9P35579 1960 aaKnown RBP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 SDHDO14521 159 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 ARPC2O15144 300 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 ULK1O75385 1050 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 ZNF12P17014 697 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 MTPNP58546 118 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 NIPAL4Q0D2K0 466 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 LCP2Q13094 533 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 CDH18Q13634 790 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 GK3PQ14409 553 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 NANOGNBQ7Z5D8 188 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 MTMR14Q8NCE2 650 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 GTF3C2Q8WUA4 911 aaPredicted RBP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 SLC9A7Q96T83 725 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 REEP1Q9H902 201 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 UBA2Q9UBT2 640 aaPredicted RBP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 SNX8Q9Y5X2 465 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 BCORQ6W2J9 1755 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 AQP12BA6NM10 295 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 CLDN25C9JDP6 229 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 PDHXO00330 501 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 TRIM24O15164 1050 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 MATN3O15232 486 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 NOBOXO60393 691 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 CYP4F2P78329 520 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 CYP4F3Q08477 520 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 KRR1Q13601 381 aaKnown RBP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 CPSF6Q16630 551 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 ZNF423Q2M1K9 1284 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 AP5B1Q2VPB7 878 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 SYTL3Q4VX76 610 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 UGT2A3Q6UWM9 527 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 AQP12AQ8IXF9 295 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 LEMD2Q8NC56 503 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 GPR152Q8TDT2 470 aa10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
SMARCC2-209ENST00000550164 ELMO1Q92556 727 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms