RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ISCUQ9H1K1 167 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ESRP2Q9H6T0 727 aaKnown RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 CLK4Q9HAZ1 481 aaKnown RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 BPIFA1Q9NP55 256 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MKKSQ9NPJ1 570 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 CYSLTR2Q9NS75 346 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF215Q9UL58 517 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MTMR6Q9Y217 621 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 AHDC1Q5TGY3 1603 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ASXL1Q8IXJ9 1541 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 PTCH1Q13635 1447 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 DIP2AQ14689 1571 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ADGRL2O95490 1459 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 METP08581 1390 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 PHLPP1O60346 1717 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TMCC2O75069 709 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 MOSPD3O75425 235 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TSPAN9O75954 239 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 NDUFB4O95168 129 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 FTCDO95954 541 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 LCATP04180 440 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 CENPBP07199 599 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TFPIP10646 304 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF182P17025 639 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 GABRB1P18505 474 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 THPOP40225 353 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 RFX5P48382 616 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 CDH8P55286 799 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 P2RX3P56373 397 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TRAF1Q13077 416 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ARHGEF6Q15052 776 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ADIPOQQ15848 244 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ASTE1Q2TB18 679 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 GKAP1Q5VSY0 366 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 PMS2CLQ68D20 193 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 CFAP77Q6ZQR2 320 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 Q6ZSV7 163 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 GALNT5Q7Z7M9 940 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TICAM1Q8IUC6 712 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 DENND1AQ8TEH3 1009 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 LPAR1Q92633 364 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 OTULINQ96BN8 352 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 SEPT5Q99719 369 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 SH2D4AQ9H788 454 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 RANGRFQ9HD47 186 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 KRCC1Q9NPI7 259 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ANKEF1Q9NU02 776 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 SUCLA2Q9P2R7 463 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 TTLL3Q9Y4R7 772 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 STON1Q9Y6Q2 735 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 COL16A1Q07092 1604 aaPredicted RBP4.19□□□□□ -1.74
PTCH1-216ENST00000548379 STRCP1A6NGW2 1772 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 PTPRUQ92729 1446 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 ADGRL3Q9HAR2 1447 aa4.19□□□□□ -1.74
PTCH1-216ENST00000548379 C1orf167Q5SNV9 1468 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ROCK1Q13464 1354 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PTPN23Q9H3S7 1636 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM202A6NGA9 273 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 DNAJC9-AS1A6NH13 148 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 BTBD18B2RXH4 712 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 MS4A18H0YCH9 400 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PPEF2O14830 753 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 FIBPO43427 364 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PPFIA2O75334 1257 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 NDUFS3O75489 264 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 NKX2-2O95096 273 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 HSP90AA1P07900 732 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM191BP0C7N4 346 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 KRT10P13645 584 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 HOXB2P14652 356 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 GPTP24298 496 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 MCM3P25205 808 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ACTN2P35609 894 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 CHAF1BQ13112 559 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 NAE1Q13564 534 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 MYBPC2Q14324 1141 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PTGR1Q14914 329 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 RABEP1Q15276 862 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PCGF3Q3KNV8 242 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 CDONQ4KMG0 1287 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 RILPL1Q5EBL4 403 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PXDC1Q5TGL8 231 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SEPT14Q6ZU15 432 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 MON1BQ7L1V2 547 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ENOSF1Q7L5Y1 443 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF367Q7RTV3 350 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 CTU1Q7Z7A3 348 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 TSPAN33Q86UF1 283 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 HAPLN4Q86UW8 402 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 UNC5CLQ8IV45 518 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 RNF168Q8IYW5 571 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SRBD1Q8N5C6 995 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 NRACQ8N912 160 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 C7orf57Q8NEG2 295 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ARRDC2Q8TBH0 407 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 IGSF8Q969P0 613 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 ERGIC1Q969X5 290 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SLC25A28Q96A46 364 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms