RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PRKAA2P54646 552 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 STARD6P59095 220 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 SATB1Q01826 763 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 ZP2Q05996 745 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 NFATC2Q13469 925 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 GTF2H3Q13889 308 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 FAM83EQ2M2I3 478 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TYSND1Q2T9J0 566 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 EMC10Q5UCC4 262 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 LRRC66Q68CR7 880 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 KDM7AQ6ZMT4 941 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 Q7L0L9 218 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TAS2R42Q7RTR8 314 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 LYSMD3Q7Z3D4 306 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TRABD2AQ86V40 505 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 PHYKPLQ8IUZ5 450 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 IGDCC3Q8IVU1 814 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 SRRM1Q8IYB3 904 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 TTC30BQ8N4P2 665 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 OR13J1Q8NGT2 312 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 DCAKDQ8WVC6 231 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 DNAJC1Q96KC8 554 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 COPS8Q99627 209 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 GPR22Q99680 433 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 SGK2Q9HBY8 427 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 PCDH12Q9NPG4 1184 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 POLR3BQ9NW08 1133 aaPredicted RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 PIH1D1Q9NWS0 290 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 CACNA2D2Q9NY47 1150 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 B4GALT6Q9UBX8 382 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TBK1Q9UHD2 729 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 KANSL1LA0AUZ9 987 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 SRRM3A6NNA2 597 aaPredicted RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 AGPSO00116 658 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 BANF1O75531 89 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 GOT2P00505 430 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 SLC4A1P02730 911 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 OR56A5P0C7T3 313 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 CTPS1P17812 591 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 KRT4P19013 534 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 KELP23276 732 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.535e-15■■■■■ 34.9
VTN-202ENST00000539746 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 RPS9P46781 194 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 RGS4P49798 205 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 DPTQ07507 201 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 MSLNQ13421 630 aaPredicted RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 CCINQ13939 588 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 USP10Q14694 798 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 ACOX1Q15067 660 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 C2orf27AQ580R0 203 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 FSTL4Q6MZW2 842 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 SYT13Q7L8C5 426 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 PTAR1Q7Z6K3 402 aaPredicted RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 MMAAQ8IVH4 418 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 NKAPQ8N5F7 415 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 IL17RCQ8NAC3 791 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 CHST14Q8NCH0 376 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 OR2W6PQ8NHA6 318 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 RDH11Q8TC12 318 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 ZNF398Q8TD17 642 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 KCNJ9Q92806 393 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 CENPTQ96BT3 561 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 APOPT1Q96IL0 206 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 RPP25Q9BUL9 199 aaKnown RBP11.75□□□□□ -0.53
VTN-202ENST00000539746 ASB8Q9H765 288 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 KCNK9Q9NPC2 374 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 ACOT9Q9Y305 439 aa11.75□□□□□ -0.53
VTN-202ENST00000539746 CCDC162PA2VCL2 907 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 NPIPB15A6NHN6 443 aaPredicted RBP11.74□□□□□ -0.53
VTN-202ENST00000539746 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 TRIM49D1C9J1S8 452 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 TRIM24O15164 1050 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 RNGTTO60942 597 aaKnown RBP11.74□□□□□ -0.53
VTN-202ENST00000539746 RNASEH2AO75792 299 aaKnown RBP11.74□□□□□ -0.53
VTN-202ENST00000539746 TM7SF2O76062 418 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 SYF2O95926 243 aaKnown RBP11.74□□□□□ -0.53
VTN-202ENST00000539746 FTH1P02794 183 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 TIMP2P16035 220 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 MSH3P20585 1137 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 SLC1A2P43004 574 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 SEC13P55735 322 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 RAB10P61026 200 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 CREB5Q02930 508 aa11.74□□□□□ -0.53
VTN-202ENST00000539746 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
VTN-202ENST00000539746 MTM1Q13496 603 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms