RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CLYBLQ8N0X4 340 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 PHTF2Q8N3S3 785 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 SPATA6LQ8N4H0 392 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 CHCHD4Q8N4Q1 142 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 ARL14EPQ8N8R7 260 aaPredicted RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 KYQ8NBH2 561 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 KCNJ9Q92806 393 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 SGF29Q96ES7 293 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 EFCAB1Q9HAE3 211 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 ZNF334Q9HCZ1 680 aaPredicted RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 OAS3Q9Y6K5 1087 aaKnown RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 MYLKQ15746 1914 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 STX16-NPEPL1H3BU86 382 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SDHDO14521 159 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 STX16O14662 325 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 VPS4BO75351 444 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 GJB3O75712 270 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 FGF18O76093 207 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CD160O95971 181 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SLC4A1P02730 911 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CKMP06732 381 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 EPHA3P29320 983 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 MC4RP32245 332 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 GJA8P48165 433 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 PTDSS1P48651 473 aaKnown RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 DEFB103AP81534 67 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TRAF2Q12933 501 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 STX5Q13190 355 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SQLEQ14534 574 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CHSY3Q70JA7 882 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 LDB1Q86U70 411 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 MYLK4Q86YV6 388 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 AGR3Q8TD06 166 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 WDR60Q8WVS4 1066 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 ALG14Q96F25 216 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 EMILIN2Q9BXX0 1053 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 GSTO2Q9H4Y5 243 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 UTP6Q9NYH9 597 aaKnown RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 NKX1-2Q9UD57 310 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 ZMYM5Q9UJ78 669 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CDH22Q9UJ99 828 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TRMT6Q9UJA5 497 aaKnown RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TRAF6Q9Y4K3 522 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 H3BMM5 538 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CCL22O00626 93 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 NEMP1O14524 444 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 AHCYL1O43865 530 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 GPC4O75487 556 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SUPT7LO94864 414 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 PGLSO95336 258 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 IGSF6O95976 241 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 ITGAXP20702 1163 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 CSKP41240 450 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CCNHP51946 323 aaPredicted RBP13.53□□□□□ -0.24
SMG6-203ENST00000536871 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 SEMA3AQ14563 771 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 DDI1Q8WTU0 396 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 MYO19Q96H55 970 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 EXOC2Q96KP1 924 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 ATOH8Q96SQ7 321 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 CCT7Q99832 543 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 C1QTNF3Q9BXJ4 246 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
SMG6-203ENST00000536871 TGM5O43548 720 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 SNAP91O60641 907 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 PDHA1P08559 390 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 PIRTP0C851 137 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMG6-203ENST00000536871 MTTPP55157 894 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 TBL3Q12788 808 aaKnown RBP13.52□□□□□ -0.25
SMG6-203ENST00000536871 CRY1Q16526 586 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 TXNDC8Q6A555 127 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 PELI3Q8N2H9 469 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 POU5F2Q8N7G0 328 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 LEMD2Q8NC56 503 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms