RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 FLOT2Q14254 428 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 GALEQ14376 348 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 MTF1Q14872 753 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PON3Q15166 354 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PPP1R3AQ16821 1122 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 TRMT5Q32P41 509 aaKnown RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 EPC2Q52LR7 807 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 USP39Q53GS9 565 aaKnown RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 C2CD6Q53TS8 623 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ATF7IP2Q5U623 682 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ANGEL2Q5VTE6 544 aaKnown RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ATG16L1Q676U5 607 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ZFP1Q6P2D0 407 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 IZUMO2Q6UXV1 221 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 FKBP9P1Q75LS8 142 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 CAMKMTQ7Z624 323 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 RABEPKQ7Z6M1 372 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 GPR180Q86V85 440 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 KBTBD6Q86V97 674 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 TPRA1Q86W33 373 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 HORMAD1Q86X24 394 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 KIF18BQ86Y91 864 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 HERC6Q8IVU3 1022 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 TPH2Q8IWU9 490 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 CTAGE3PQ8IX95 158 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 KIF2BQ8N4N8 673 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 C10orf53Q8N6V4 93 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF366Q8N895 744 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 OR5T1Q8NG75 326 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 OR6Q1Q8NGQ2 317 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 MAGEE2Q8TD90 523 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ST7LQ8TDW4 575 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ADAMTS18Q8TE60 1221 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 STAMQ92783 540 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 TCEAL3Q969E4 200 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ELMO3Q96BJ8 720 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 SLC7A6OSQ96CW6 309 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 FUBP3Q96I24 572 aaKnown RBP eCLIP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 WNK4Q96J92 1243 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF597Q96LX8 424 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 LENG8Q96PV6 779 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 SLC2A13Q96QE2 648 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 CAMKK2Q96RR4 588 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 TGS1Q96RS0 853 aaKnown RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 DPYSL5Q9BPU6 564 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 EFHD1Q9BUP0 239 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF518BQ9C0D4 1074 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 USP44Q9H0E7 712 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 KCNK12Q9HB15 430 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PDE7BQ9NP56 450 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 CABP5Q9NP86 173 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 MYOZ1Q9NP98 299 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-201ENST00000535076 RXFP3Q9NSD7 469 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ELOVL2Q9NXB9 296 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 NDE1Q9NXR1 346 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 GLTPQ9NZD2 209 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 EPHA6Q9UF33 1036 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 BTNL2Q9UIR0 455 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 RAB23Q9ULC3 237 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ACSL5Q9ULC5 683 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PCDHGB4Q9UN71 923 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 CRYL1Q9Y2S2 319 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 UGT2A1Q9Y4X1 527 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PCDHGA1Q9Y5H4 931 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 PCDHA1Q9Y5I3 950 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 ATP8B3O60423 1300 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 SF3B1O75533 1304 aaKnown RBP eCLIP5.2□□□□□ -1.582e-7■■■■■ 52.5
SNHG1-201ENST00000535076 NEO1Q92859 1461 aa5.2□□□□□ -1.58
SNHG1-201ENST00000535076 LOC100506127A0A0U1RQW1 187 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 GRID2IPA4D2P6 1211 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 OR6C70A6NIJ9 312 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PRR33A8MZF0 331 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 KBTBD13C9JR72 458 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CLDN4O14493 209 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SCAMP1O15126 338 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 BUD23O43709 281 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 GPRIN2O60269 458 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 SYNCRIPO60506 623 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 UGDHO60701 494 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MFAP3LO75121 409 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ENTPD5O75356 428 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ULK1O75385 1050 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TADA2AO75478 443 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PPM1BO75688 479 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 RPP14O95059 124 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 HOXD4P09016 255 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 OR4E1P0C645 316 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 UBTFL1P0CB47 393 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CDH1P12830 882 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 MLNP12872 115 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 PRF1P14222 555 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 TNNI1P19237 187 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 HLA-DPA1P20036 260 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 WARSP23381 471 aaKnown RBP5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CCND2P30279 289 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 CRHR1P34998 444 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 ACTR1BP42025 376 aa5.19□□□□□ -1.58
SNHG1-201ENST00000535076 RAP1GAPP47736 663 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms