RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SRCP12931 536 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ADRB3P13945 408 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ITGB7P26010 798 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 YPEL5P62699 121 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 PPARDQ03181 441 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 KLF1Q13351 362 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 SEPT6Q14141 434 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 TFDP2Q14188 446 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ANKRD20A8PQ5CZ79 823 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 BBS12Q6ZW61 710 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 TICAM1Q8IUC6 712 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 KLHL7Q8IXQ5 586 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ATP6V0D2Q8N8Y2 350 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 ATP11CQ8NB49 1132 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 UBXN4Q92575 508 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 MAGOHBQ96A72 148 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 HAPLN3Q96S86 360 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 KRT12Q99456 494 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 CWC15Q9P013 229 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 IL36AQ9UHA7 158 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 FADS3Q9Y5Q0 445 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 NBPF19A0A087WUL8 3843 aa11.36□□□□□ -0.59
TRAPPC4-213ENST00000533149 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZNF487B1APH4 448 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM72CH0Y354 149 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 H3BRJ5 948 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CCDC188H7C350 402 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 AGRPO00253 132 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TOR1BO14657 336 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TSPAN6O43657 245 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CREB3O43889 395 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PAGE1O75459 146 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CNTN5O94779 1100 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 LIFP15018 202 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PNLIPP16233 465 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 POU3F2P20265 443 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 AMPD1P23109 780 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 ARL4AP40617 200 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CLCN6P51797 869 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TUBB4BP68371 445 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 NAA30Q147X3 362 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PHF19Q5T6S3 580 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM72AQ5TYM5 149 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM72DQ6L9T8 149 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 HEATR4Q86WZ0 1026 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM72BQ86X60 149 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CIR1Q86X95 450 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 VSIG1Q86XK7 387 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PQLC3Q8N755 202 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 GALNT11Q8NCW6 608 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PCDH19Q8TAB3 1148 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 GRIN3AQ8TCU5 1115 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 APOBEC4Q8WW27 367 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 C1orf54Q8WWF1 131 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAF2Q96CS3 445 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PRMT1Q99873 361 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZNF670Q9BS34 389 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 SIK2Q9H0K1 926 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 APPL1Q9UKG1 709 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 GPR34Q9UPC5 381 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 R3HDM2Q9Y2K5 976 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 OR51B4Q9Y5P0 310 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 RNF215Q9Y6U7 377 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TRPM6Q9BX84 2022 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CACNA1DQ01668 2161 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 IGLON5A6NGN9 336 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 EEF2KO00418 725 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PHF2O75151 1096 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 LEFTY1O75610 366 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 DDAH2O95865 285 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CTSEP14091 401 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 GLB1P16278 677 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 COILP38432 576 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 HCAR3P49019 387 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 MLLT10P55197 1068 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 DYNLT1P63172 113 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 SNX1Q13596 522 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CCNG2Q16589 344 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CYP1B1Q16678 543 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 MACC1Q6ZN28 852 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 GKN2Q86XP6 184 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLITRK4Q8IW52 837 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 Q8N9G6 341 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TEX19Q8NA77 164 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 CHST14Q8NCH0 376 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLC45A3Q96JT2 553 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms