RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SLC30A1Q9Y6M5 507 aa14.74□□□□□ -0.05
ECHDC1-220ENST00000528402 GBF1Q92538 1859 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 C5orf67F2Z3F1 127 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 GRID2O43424 1007 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 TLL1O43897 1013 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 CHRNGP07510 517 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 THRAP10827 490 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 HSPA8P11142 646 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 MPSTP25325 297 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 SERPINA4P29622 427 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 CTNNB1P35222 781 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 COPAP53621 1224 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 ERVFC1P60507 584 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 PTPRCAPQ14761 206 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 TMEM207Q6UWW9 146 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 FRMD7Q6ZUT3 714 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 PLPP6Q8IY26 295 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 SPATA6LQ8N4H0 392 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 OR2AP1Q8NGE2 309 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 SPPL3Q8TCT6 385 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 SH3RF2Q8TEC5 729 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 BADQ92934 168 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 LMLNQ96KR4 655 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 MIPEPQ99797 713 aa14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 CPEB1Q9BZB8 566 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 OAS3Q9Y6K5 1087 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-220ENST00000528402 UBA6A0AVT1 1052 aaPredicted RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 H3BMM5 538 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF197O14709 1029 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC9A3R1O14745 358 aaPredicted RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 CCL16O15467 120 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 TM7SF2O76062 418 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC4A1P02730 911 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 FMO4P31512 558 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 MXRA7P84157 204 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 TIAL1Q01085 375 aaKnown RBP eCLIP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 KDSRQ06136 332 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC9B1Q4ZJI4 515 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 ZRANB3Q5FWF4 1079 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 ZDHHC20Q5W0Z9 365 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 TXNDC11Q6PKC3 985 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 EFHBQ8N7U6 833 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 CEP70Q8NHQ1 597 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 RP9Q8TA86 221 aaKnown RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SHKBP1Q8TBC3 707 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 WFDC5Q8TCV5 224 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 ACTRT2Q8TDY3 377 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 POF1BQ8WVV4 589 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 KCNJ9Q92806 393 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 MAELQ96JY0 434 aaKnown RBP14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 LYSMD1Q96S90 227 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC2A11Q9BYW1 496 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 ALG9Q9H6U8 611 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 DCLRE1BQ9H816 532 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 FKBPLQ9UIM3 349 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 SLC25A13Q9UJS0 675 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 HS3ST2Q9Y278 367 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 PPIL1Q9Y3C6 166 aa14.72□□□□□ -0.05
ECHDC1-220ENST00000528402 A0A0J9YYE9 177 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 RGSL1A5PLK6 1076 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 KERAO60938 352 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 CIB2O75838 187 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 MT-CO1P00395 513 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 TRBC1P01850 177 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 FGF4P08620 206 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF7P17097 686 aaPredicted RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 RPS3P23396 243 aaKnown RBP eCLIP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 SP100P23497 879 aaPredicted RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 HERVK_113P63132 956 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 XIAPP98170 497 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 KLF10Q13118 480 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PEX6Q13608 980 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 NAA25Q14CX7 972 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 HERC3Q15034 1050 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 CRY1Q16526 586 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PTPRNQ16849 979 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PITRM1Q5JRX3 1037 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF678Q5SXM1 525 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 VWA5B1Q5TIE3 1220 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PLPP4Q5VZY2 271 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 TPGS1Q6ZTW0 290 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 SCUBE1Q8IWY4 988 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PCDH20Q8N6Y1 951 aaKnown RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ENDOVQ8N8Q3 282 aaKnown RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 RBM15BQ8NDT2 890 aaKnown RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 SGF29Q96ES7 293 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 PDLIM5Q96HC4 596 aaKnown RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF641Q96N77 438 aaPredicted RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ANKRD27Q96NW4 1050 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 RTKNQ9BST9 563 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ERVK-6Q9BXR3 956 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 RNPEPL1Q9HAU8 725 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ZFYVE1Q9HBF4 777 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 POLR3BQ9NW08 1133 aaPredicted RBP14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 NDE1Q9NXR1 346 aa14.71□□□□□ -0.05
ECHDC1-220ENST00000528402 ZBTB14O43829 449 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 POP4O95707 220 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms