RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DOK6Q6PKX4 331 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ADAMTSL4Q6UY14 1074 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TMPRSS9Q7Z410 1059 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 VSIG1Q86XK7 387 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 Q8N9G6 341 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 AP2M1Q96CW1 435 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 EID2BQ96D98 161 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 SCARF2Q96GP6 870 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ZNF578Q96N58 590 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TRIB3Q96RU7 358 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 LYSMD1Q96S90 227 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 LRRN3Q9H3W5 708 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 PRORYQ9H606 182 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 GOLGA6AQ9NYA3 693 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 SAE1Q9UBE0 346 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ATXN7L1Q9ULK2 861 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 CNOT6Q9ULM6 557 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 PCYT1BQ9Y5K3 369 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 AHCTF1Q8WYP5 2266 aa10.4□□□□□ -0.75
PRPF40B-204ENST00000527253 B4DGG1 531 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 APOL1O14791 398 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 B4GAT1O43505 415 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 IVLP07476 585 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 KRT10P13645 584 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 GLB1P16278 677 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 NFKBIAP25963 317 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 CDKN2BP42772 138 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC1A1P43005 524 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 MAGEA1P43355 309 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 GPR1P46091 355 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 EPHB1P54762 984 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 MAZP56270 477 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RPL26P61254 145 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 DYNLT1P63172 113 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 B4GALNT1Q00973 533 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 CTBSQ01459 385 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 TLE3Q04726 772 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 AP1B1Q10567 949 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SPIDRQ14159 915 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 C14orf28Q4W4Y0 310 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SPRED1Q7Z699 444 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RFX6Q8HWS3 928 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SPACA3Q8IXA5 215 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RHOT1Q8IXI2 618 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 NDUFAF2Q8N183 169 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 PATE1Q8WXA2 126 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 TADA1Q96BN2 335 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 IMP4Q96G21 291 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 NAF1Q96HR8 494 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 COX14Q96I36 57 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC46A1Q96NT5 459 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 DPEP2Q9H4A9 486 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 SYNDIG1Q9H7V2 258 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 TRNAU1APQ9NX07 287 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 KCTD5Q9NXV2 234 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 TAAR2Q9P1P5 351 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 LRIT1Q9P2V4 623 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 APPL1Q9UKG1 709 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RPL26L1Q9UNX3 145 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 OAS3Q9Y6K5 1087 aaKnown RBP10.39□□□□□ -0.75
PRPF40B-204ENST00000527253 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 FADS2P1A8MWK0 482 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ANKRD66B4E2M5 251 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 D6RAR5 112 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 INPP4BO15327 924 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 RRP8O43159 456 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 EML2O95834 649 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 PECAM1P16284 738 aaPredicted RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF30P17039 623 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 HADHBP55084 474 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ERVPABLB-1P60509 514 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ZFP36L1Q07352 338 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 GALNT3Q14435 633 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 PDK1Q15118 436 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 PYCR3Q53H96 274 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 FOXR1Q6PIV2 292 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC30A9Q6PML9 568 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 SPOCD1Q6ZMY3 1216 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 LRRC69Q6ZNQ3 347 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 MARK2Q7KZI7 788 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 KDELC2Q7Z4H8 507 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 CCNJLQ8IV13 435 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 NRSN1Q8IZ57 195 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 LSMEM2Q8N112 164 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 NAGSQ8N159 534 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ARL14Q8N4G2 192 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 OR6C4Q8NGE1 309 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 SPATA22Q8NHS9 363 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 WDR36Q8NI36 951 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 WDR48Q8TAF3 677 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms