RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 A4GNTQ9UNA3 340 aa4□□□□□ -1.77
CD44-219ENST00000525685 LRP12Q9Y561 859 aa4□□□□□ -1.77
CD44-219ENST00000525685 QSER1Q2KHR3 1735 aa4□□□□□ -1.77
CD44-219ENST00000525685 PALLDQ8WX93 1383 aa4□□□□□ -1.77
CD44-219ENST00000525685 KCPQ6ZWJ8 1503 aa4□□□□□ -1.77
CD44-219ENST00000525685 ZNF831Q5JPB2 1677 aa4□□□□□ -1.77
CD44-219ENST00000525685 KDM3BQ7LBC6 1761 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 C4BP0C0L5 1744 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 BECN2A8MW95 431 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 KLRF2D3W0D1 207 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 SMAD6O43541 496 aaKnown RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 TBX18O95935 607 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 MT-CYBP00156 380 aaPredicted RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 KRT10P13645 584 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 MYF6P23409 242 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 NFKBIAP25963 317 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 MAN1A1P33908 653 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 TTKP33981 857 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 CPOXP36551 454 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 PMS2P54278 862 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 ROR2Q01974 943 aaKnown RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 PTP4A2Q12974 167 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 KRT32Q14532 448 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 DUSP6Q16828 381 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 ASPHD1Q5U4P2 390 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 CCDC30Q5VVM6 783 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 TYW3Q6IPR3 259 aaKnown RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 ZNF549Q6P9A3 640 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 PDILTQ8N807 584 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 TDRD7Q8NHU6 1098 aaKnown RBP3.99□□□□□ -1.77
CD44-219ENST00000525685 ASB5Q8WWX0 329 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 PIGBQ92521 554 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 PLEKHF1Q96S99 279 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 MXRA8Q9BRK3 442 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 UBA5Q9GZZ9 404 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 SMYD2Q9NRG4 433 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 DIAPH3Q9NSV4 1193 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 TMEM51Q9NW97 253 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 TMOD3Q9NYL9 352 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 IL36RNQ9UBH0 155 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 PTGDR2Q9Y5Y4 395 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 CEMIPQ8WUJ3 1361 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 LAMB4A4D0S4 1761 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 LRP5O75197 1615 aa3.99□□□□□ -1.77
CD44-219ENST00000525685 MAPK8IP3Q9UPT6 1336 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 A0A1B0GVT2 93 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 HSPB2A8KAH6 182 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 B4E171 279 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 ERVV-2B6SEH9 535 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 SPRY3O43610 288 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 HEXAP06865 529 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 SRD5A1P18405 259 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 EDN2P20800 178 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 CHMP24386 653 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 EPHA8P29322 1005 aaPredicted RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 HOXD3P31249 432 aaPredicted RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 ARL3P36405 182 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 MLH1P40692 756 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 TSPAN7P41732 249 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 GABRB2P47870 512 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 GEMIN4P57678 1058 aaKnown RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 CLDN2P57739 230 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 FAM27E3Q08E93 113 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 NEDD9Q14511 834 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 WDR43Q15061 677 aaKnown RBP eCLIP3.98□□□□□ -1.77
CD44-219ENST00000525685 HSPB2Q16082 182 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 TCTN1Q2MV58 587 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 ESCO2Q56NI9 601 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 FAM180BQ6P0A1 224 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 CDC73Q6P1J9 531 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 Q6ZSV7 163 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 CCDC105Q8IYK2 499 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 TEX45Q8NA69 505 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 OR14A16Q8NHC5 309 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 OIT3Q8WWZ8 545 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 C7orf26Q96N11 449 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 RANBP17Q9H2T7 1088 aaKnown RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 MRPL44Q9H9J2 332 aaKnown RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 CYSLTR2Q9NS75 346 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 AAR2Q9Y312 384 aaKnown RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 LAS1LQ9Y4W2 734 aaKnown RBP3.98□□□□□ -1.77
CD44-219ENST00000525685 UBR3Q6ZT12 1888 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 C4AP0C0L4 1744 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 EP400Q96L91 3159 aa3.98□□□□□ -1.77
CD44-219ENST00000525685 I6L893 689 aaPredicted RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 SEC14L5O43304 696 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 TNFSF14O43557 240 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 LDB2O43679 373 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 SEC14L2O76054 403 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 SEC31AO94979 1220 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 CCNDBP1O95273 360 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 TFP02787 698 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 ETFAP13804 333 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 HOXB2P14652 356 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 RYKP34925 604 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 RPL3P39023 403 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms