RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	GPC6	Q9Y625	555 aa	Predicted RBP	7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	CEPT1	Q9Y6K0	416 aa		7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	RPS6KL1	Q9Y6S9	549 aa		7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	MUC6	Q6W4X9	2439 aa		7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	ANKRD36	A6QL64	1941 aa		7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	PTPRD	P23468	1912 aa		7.85	□□□□□ -1.15
SPIDR-223	ENST00000524033	MIA3	Q5JRA6	1907 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PLXNA4	Q9HCM2	1894 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	LOC100653049	A0A140TA62	436 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	SMIM28	A0A1B0GU29	152 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033		A0A1W2PNR3	127 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TCRBV3S1	A0A5B6	114 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TRIM64	A6NGJ6	449 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033		F5H423	210 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	AIM2	O14862	343 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	XPO1	O14980	1071 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	RNASEH2A	O75792	299 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	KRT34	O76011	436 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	VAPB	O95292	243 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PIGN	O95427	931 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PAPLN	O95428	1278 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PYGL	P06737	847 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	HNRNPA1	P09651	372 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	FAM58BP	P0C7Q3	252 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CDK4	P11802	303 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	LAMP2	P13473	410 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ZNF23	P17027	643 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ME2	P23368	584 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	EPHA3	P29320	983 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TKT	P29401	623 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	SLC5A2	P31639	672 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	OR1D2	P34982	312 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	EIF1AX	P47813	144 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	POLD2	P49005	469 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	NPY2R	P49146	381 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	SULT1E1	P49888	294 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	RPL14	P50914	215 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CLCNKB	P51801	687 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	NR1H2	P55055	460 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	DNAJB13	P59910	316 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PITX1	P78337	314 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PTS	Q03393	145 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PPID	Q08752	370 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	IFRD2	Q12894	506 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	OLIG2	Q13516	323 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PTK2B	Q14289	1009 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	GK3P	Q14409	553 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PPP2R5D	Q14738	602 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	GRM3	Q14832	879 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CNGA3	Q16281	694 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PSMD5	Q16401	504 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	UPP1	Q16831	310 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ALKAL1	Q6UXT8	129 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	HACD2	Q6Y1H2	254 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	DPH6	Q7L8W6	267 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	GRASP	Q7Z6J2	395 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	KCNMB4	Q86W47	210 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ZC3HC1	Q86WB0	502 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CARM1	Q86X55	608 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	FAM131B	Q86XD5	332 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CCDC117	Q8IWD4	279 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CENPL	Q8N0S6	344 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	DEFB106A	Q8N104	65 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TMEM105	Q8N8V8	129 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	HIPK4	Q8NE63	616 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ZFP28	Q8NHY6	868 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TRPC4AP	Q8TEL6	797 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	GAB3	Q8WWW8	586 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	SREK1	Q8WXA9	508 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ITFG2	Q969R8	447 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	NMD3	Q96D46	503 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	HDAC11	Q96DB2	347 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	SUSD3	Q96L08	255 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	UROC1	Q96N76	676 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ZMAT2	Q96NC0	199 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CATSPER2	Q96P56	530 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	GPR78	Q96P69	363 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PGLYRP2	Q96PD5	576 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PPP1R10	Q96QC0	940 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	MYADM	Q96S97	322 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CDRT15	Q96T59	188 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	AGAP2	Q99490	1192 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	LPIN3	Q9BQK8	851 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ACE2	Q9BYF1	805 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	ILKAP	Q9H0C8	392 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	RHOJ	Q9H4E5	214 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	WDR55	Q9H6Y2	383 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	COPS7B	Q9H9Q2	264 aa	Predicted RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CAB39L	Q9H9S4	337 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	LRRC4	Q9HBW1	653 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	FAM86C1	Q9NVL1	165 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PIH1D1	Q9NWS0	290 aa	Known RBP	7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	TXNDC16	Q9P2K2	825 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	WNT16	Q9UBV4	365 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PACSIN3	Q9UKS6	424 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	VANGL2	Q9ULK5	521 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	DUSP12	Q9UNI6	340 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	CDYL	Q9Y232	598 aa		7.84	□□□□□ -1.15
SPIDR-223	ENST00000524033	PCDHGA7	Q9Y5G6	932 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms