RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PTRH1Q86Y79 214 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CCNYQ8ND76 341 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 TADA1Q96BN2 335 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 ATP6V1G3Q96LB4 118 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 RPRD1AQ96P16 312 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CCNL2Q96S94 520 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC39A8Q9C0K1 460 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 MTG2Q9H4K7 406 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 LRRC4CQ9HCJ2 640 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 PRSS16Q9NQE7 514 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 HAUS2Q9NVX0 235 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 AGO1Q9UL18 857 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 NCKAP1Q9Y2A7 1128 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 AAR2Q9Y312 384 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 A0A1W2PNU3 283 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 TCRBV7S3A2A0A539 114 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PMS2P1A4D2B8 440 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 RASA4BC9J798 803 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 TLR4O00206 839 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 RASA4O43374 803 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PRAMEF11O60813 436 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 CDH16O75309 829 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ANXA9O76027 345 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 AGTP01019 485 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 APRTP07741 180 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 OAS2P29728 719 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 CORO1AP31146 461 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 CD68P34810 354 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 OXCT1P55809 520 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 NXPH1P58417 271 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PDIA2Q13087 525 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SRSF6Q13247 344 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ALFQ53S48 1182 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 RAP1GAP2Q684P5 730 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 STEAP4Q687X5 459 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 LINC00523Q86TU6 105 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SPATS2Q86XZ4 545 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 CNTD1Q8N815 330 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF557Q8N988 423 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PYROXD1Q8WU10 500 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 TLCD1Q96CP7 247 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SERAC1Q96JX3 654 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SIGLEC10Q96LC7 697 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC46A1Q96NT5 459 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ABCG4Q9H172 646 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ACSS3Q9H6R3 686 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 LRRC40Q9H9A6 602 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 PDFQ9HBH1 243 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ARNT2Q9HBZ2 717 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SAYSD1Q9NPB0 183 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 NDFIP2Q9NV92 336 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 MPP6Q9NZW5 540 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SERGEFQ9UGK8 458 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 IPO11Q9UI26 975 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC24A2Q9UI40 661 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 ACTL7BQ9Y614 415 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 DOCK9Q9BZ29 2069 aa10.53□□□□□ -0.72
PDLIM5-217ENST00000512274 KIF26BQ2KJY2 2108 aa10.52□□□□□ -0.72
PDLIM5-217ENST00000512274 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.72
PDLIM5-217ENST00000512274 MAGEB16A2A368 324 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 FFAR2O15552 330 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 CNTN5O94779 1100 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 MAP3K6O95382 1288 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 CES1P23141 567 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 ATP5DP30049 168 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 SLC6A4P31645 630 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 RXRGP48443 463 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 NUMBP49757 651 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PAPOLAP51003 745 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 ZBTB17Q13105 803 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 NAB1Q13506 487 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PRPSAP1Q14558 356 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 POLD3Q15054 466 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 KYNUQ16719 465 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 SKIDA1Q1XH10 827 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 CEP85LQ5SZL2 805 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 FNBP1LQ5T0N5 605 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 NAPEPLDQ6IQ20 393 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 CCDC25Q86WR0 208 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 DENND1CQ8IV53 801 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 TP53INP2Q8IXH6 220 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 ZBED8Q8IZ13 594 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 HJURPQ8NCD3 748 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 ARHGEF2Q92974 986 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 ATXN7L3BQ96GX2 97 aa10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 PRICKLE1Q96MT3 831 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 EBNA1BP2Q99848 306 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-217ENST00000512274 GORASP1Q9BQQ3 440 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms