RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NOMO1Q15155 1222 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 NR0B2Q15466 257 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 PPP2R5EQ16537 467 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 BBS12Q6ZW61 710 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 LYSMD3Q7Z3D4 306 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 MAPK15Q8TD08 544 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 TEKT5Q96M29 485 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 QKIQ96PU8 341 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDX41-213ENST00000512027 WDR24Q96S15 920 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 MLPHQ9BV36 600 aaPredicted RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 RIOK2Q9BVS4 552 aaKnown RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 FRMD8Q9BZ67 464 aaPredicted RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 CCDC86Q9H6F5 360 aaKnown RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 CARS2Q9HA77 564 aaKnown RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 GPR34Q9UPC5 381 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 TMEM98Q9Y2Y6 226 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 PCDHB1Q9Y5F3 818 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 PCDHA3Q9Y5H8 950 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 ZFHX4Q86UP3 3567 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 EME2A4GXA9 379 aaPredicted RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 SRRM3A6NNA2 597 aaPredicted RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 FTCDO95954 541 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 MT-CO3P00414 261 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 CDK4P11802 303 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 CTNNA2P26232 953 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 GNPDA1P46926 289 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 RPL26P61254 145 aaKnown RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 DPTQ07507 201 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 BZW1Q7L1Q6 419 aaKnown RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 TAF8Q7Z7C8 310 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 GKN2Q86XP6 184 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 ZNF567Q8N184 647 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 TADA1Q96BN2 335 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 EID2BQ96D98 161 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 LYSMD1Q96S90 227 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 KLHL8Q9P2G9 620 aaPredicted RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 PADI4Q9UM07 663 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 SUFUQ9UMX1 484 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 RPL26L1Q9UNX3 145 aaKnown RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 SHOC2Q9UQ13 582 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 ZFC3H1O60293 1989 aaKnown RBP16.43■□□□□ 0.22
DDX41-213ENST00000512027 CHD6Q8TD26 2715 aa16.43■□□□□ 0.22
DDX41-213ENST00000512027 CFAP47Q6ZTR5 3102 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 B4DGG1 531 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 APOC4-APOC2K7ER74 178 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 TNFRSF10CO14798 259 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 APOC2P02655 101 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 GP1BAP07359 652 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 PYGMP11217 842 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 AK4P27144 223 aaPredicted RBP16.42■□□□□ 0.22
DDX41-213ENST00000512027 RBL1P28749 1068 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 E2F1Q01094 437 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 OTUD4Q01804 1114 aaKnown RBP16.42■□□□□ 0.22
DDX41-213ENST00000512027 CDK18Q07002 472 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 CCDC181Q5TID7 509 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 MARK2Q7KZI7 788 aaKnown RBP16.42■□□□□ 0.22
DDX41-213ENST00000512027 PROSER1Q86XN7 944 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 NRROSQ86YC3 692 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 PDCD7Q8N8D1 485 aaKnown RBP16.42■□□□□ 0.22
DDX41-213ENST00000512027 DCBLD1Q8N8Z6 715 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 ACTL9Q8TC94 416 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 ADGRE3Q9BY15 652 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 OSBPL8Q9BZF1 889 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 SYNDIG1Q9H7V2 258 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 USP29Q9HBJ7 922 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 KCTD5Q9NXV2 234 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 RABGEF1Q9UJ41 708 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 PLEKHM1Q9Y4G2 1056 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 SPO11Q9Y5K1 396 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 ST14Q9Y5Y6 855 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 CAPN6Q9Y6Q1 641 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 BPTFQ12830 3046 aa16.42■□□□□ 0.22
DDX41-213ENST00000512027 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 FADS2P1A8MWK0 482 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 H7C0C1 242 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 TEAD1P28347 426 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 CHRNA4P43681 627 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ATP5OP48047 213 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 SPINT3P49223 89 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 RWDD2BP57060 319 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 KIF5AQ12840 1032 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ALS2CLQ60I27 953 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 KDELC1Q6UW63 502 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ADAMTSL4Q6UY14 1074 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ZNF765Q7L2R6 523 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ARL10Q8N8L6 244 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 FAM46DQ8NEK8 389 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 HTR3CQ8WXA8 447 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 SCG3Q8WXD2 468 aaKnown RBP16.41■□□□□ 0.22
DDX41-213ENST00000512027 GLMNQ92990 594 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 CCDC74AQ96AQ1 378 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 OXNAD1Q96HP4 312 aaPredicted RBP16.41■□□□□ 0.22
DDX41-213ENST00000512027 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ABCG4Q9H172 646 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 ARFGAP3Q9NP61 516 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 EVA1BQ9NVM1 165 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 DNPEPQ9ULA0 475 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms