RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 PRPF4O43172 522 aaKnown RBP eCLIP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SPRY1O43609 319 aaPredicted RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 ATP2C2O75185 946 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 RNF8O76064 485 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 TRUB2O95900 331 aaKnown RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SUPT20HL2P0C7V6 817 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 THEGLP0DJG4 465 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 BPIFB3P59826 476 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 TUBB4BP68371 445 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 FAM27E3Q08E93 113 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 PMPCAQ10713 525 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 FOXI1Q12951 378 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 NAE1Q13564 534 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SUPT20HL1Q3ZLR7 823 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 MEX3CQ5U5Q3 659 aaKnown RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 TMEM198Q66K66 360 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SHQ1Q6PI26 577 aaKnown RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 FBXO46Q6PJ61 603 aaPredicted RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 PQLC2Q6ZP29 291 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 HAPLN4Q86UW8 402 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 PALM2Q8IXS6 379 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SLC25A41Q8N5S1 370 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 CORO2AQ92828 525 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 DVL3Q92997 716 aaPredicted RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 CCDC43Q96MW1 224 aaKnown RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 NUDCD1Q96RS6 583 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 CDRT15Q96T59 188 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 ACOX2Q99424 681 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 C1QTNF3Q9BXJ4 246 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 MAGIXQ9H6Y5 334 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SLC2A4RGQ9NR83 387 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
PMPCB-208ENST00000498530 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.1□□□□□ -1.43
PMPCB-208ENST00000498530 KANSL1LA0AUZ9 987 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 ARHGEF37A1IGU5 675 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 TMEM202A6NGA9 273 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 ANXA2P2A6NMY6 339 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 C19orf81C9J6K1 198 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 AKR1B15C9JRZ8 316 aaPredicted RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 K7ESM1 405 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SMAD9O15198 467 aaKnown RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 MT-ND3P03897 115 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SRCP12931 536 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 TCEA1P23193 301 aaKnown RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 DCTDP32321 178 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 ATP6V1E1P36543 226 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 BMXP51813 675 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SIM1P81133 766 aaPredicted RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SORDQ00796 357 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 YWHAHQ04917 246 aaPredicted RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SPOCK1Q08629 439 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SREBF2Q12772 1141 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 PTK6Q13882 451 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 NFE2L1Q14494 772 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SOWAHAQ2M3V2 549 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 C2orf76Q3KRA6 126 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 PRAMEF19Q5SWL8 479 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 HIST2H2BCQ6DN03 193 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 HIST2H2BDQ6DRA6 164 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 CES5AQ6NT32 575 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 TRILQ7L0X0 811 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 OTOAQ7RTW8 1153 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 HAUS6Q7Z4H7 955 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 ADCK2Q7Z695 626 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 CEP57Q86XR8 500 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 DDIASQ8IXT1 998 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 PARP16Q8N5Y8 322 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 OR8K5Q8NH50 307 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 CAVIN3Q969G5 261 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 VCPIP1Q96JH7 1222 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 EGFL8Q99944 293 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 BDH2Q9BUT1 245 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SPAG4Q9NPE6 437 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 PNRC2Q9NPJ4 139 aaKnown RBP6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SERGEFQ9UGK8 458 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 ADAM21Q9UKJ8 722 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 KLHL20Q9Y2M5 609 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 SLC4A4Q9Y6R1 1079 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 KIF21AQ7Z4S6 1674 aa6.09□□□□□ -1.43
PMPCB-208ENST00000498530 IGSF1Q8N6C5 1336 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 C1orf226A1L170 272 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 A4D1N5 150 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 DPPA5A6NC42 116 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 ENO4A6NNW6 628 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 KDM4EB2RXH2 506 aaPredicted RBP6.08□□□□□ -1.44
PMPCB-208ENST00000498530 DDX39AO00148 427 aaKnown RBP6.08□□□□□ -1.44
PMPCB-208ENST00000498530 RHODO00212 210 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 DNM1LO00429 736 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 CYP2A6P11509 494 aaPredicted RBP6.08□□□□□ -1.44
PMPCB-208ENST00000498530 VPREB1P12018 145 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 RARRES1P49788 294 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 CAPZA1P52907 286 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 YPEL5P62699 121 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
PMPCB-208ENST00000498530 PPIGQ13427 754 aaKnown RBP eCLIP6.08□□□□□ -1.442e-6■□□□□ 10.2
PMPCB-208ENST00000498530 SMC1AQ14683 1233 aaKnown RBP6.08□□□□□ -1.44
PMPCB-208ENST00000498530 DLG2Q15700 870 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms