RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 UHRF2Q96PU4 802 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 NUF2Q9BZD4 464 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 SPRY4Q9C004 299 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 MMP28Q9H239 520 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 BPIFA1Q9NP55 256 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 KLHL1Q9NR64 748 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 TINAGQ9UJW2 476 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 FBXO9Q9UK97 447 aaPredicted RBP4.18□□□□□ -1.74
TRIM4-205ENST00000496896 CCDC144AA2RUR9 1427 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 PRAG1Q86YV5 1406 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 UTYO14607 1347 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 MAGI2Q86UL8 1455 aa4.18□□□□□ -1.74
TRIM4-205ENST00000496896 NPC1L1Q9UHC9 1359 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 NINLQ9Y2I6 1382 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 FAM135AQ9P2D6 1515 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 PLEKHD1A6NEE1 506 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 BCAT2O15382 392 aaPredicted RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 HOXC11O43248 304 aaPredicted RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TSPY4P0CV99 314 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TSPY10P0CW01 314 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 SHMT1P34896 483 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 DEKP35659 375 aaKnown RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 METAP2P50579 478 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 CLCNKAP51800 687 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 ZNF132P52740 706 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TRPC3Q13507 836 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 CCDC6Q16204 474 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 CTF1Q16619 201 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 PRICKLE4Q2TBC4 344 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TRNP1Q6NT89 227 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 SLC22A25Q6T423 547 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 FOXRED2Q8IWF2 684 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 DHX40Q8IX18 779 aaKnown RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 DSELQ8IZU8 1212 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 MAB21L3Q8N8X9 362 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 NEK9Q8TD19 979 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 ZBTB10Q96DT7 871 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 FAM110AQ9BQ89 295 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TTYH1Q9H313 450 aaPredicted RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 TMEM30AQ9NV96 361 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 RCOR1Q9UKL0 485 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 A4GNTQ9UNA3 340 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 ADAM18Q9Y3Q7 739 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 LSM4Q9Y4Z0 139 aaKnown RBP4.17□□□□□ -1.74
TRIM4-205ENST00000496896 ERBINQ96RT1 1412 aa4.17□□□□□ -1.74
TRIM4-205ENST00000496896 NUP155O75694 1391 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 KIAA1210Q9ULL0 1709 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 PRG4Q92954 1404 aaPredicted RBP4.16□□□□□ -1.74
TRIM4-205ENST00000496896 SCAPERQ9BY12 1400 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 A0A0G2JPF8 293 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 A0A1W2PQM1 296 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 TTC36A6NLP5 189 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 HNRNPCL3B7ZW38 293 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 TSPAN4O14817 238 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 HNRNPCL1O60812 293 aaKnown RBP4.16□□□□□ -1.74
TRIM4-205ENST00000496896 HNRNPCL4P0DMR1 293 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 USP8P40818 1118 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 HNRNPH2P55795 449 aaKnown RBP4.16□□□□□ -1.74
TRIM4-205ENST00000496896 PPP2R5BQ15173 497 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 GPR68Q15743 365 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 CCDC184Q52MB2 194 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 WDR73Q6P4I2 378 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 GDPD4Q6W3E5 623 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 ZBTB2Q8N680 514 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.16□□□□□ -1.74
TRIM4-205ENST00000496896 HUS1BQ8NHY5 278 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 SLC41A2Q96JW4 573 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 TTC14Q96N46 770 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 EPYCQ99645 322 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 KCNN2Q9H2S1 579 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 BRF2Q9HAW0 419 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.16□□□□□ -1.74
TRIM4-205ENST00000496896 GJD2Q9UKL4 321 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 SCINQ9Y6U3 715 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 ARAP3Q8WWN8 1544 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 DUOX2Q9NRD8 1548 aa4.16□□□□□ -1.74
TRIM4-205ENST00000496896 SYNMO15061 1565 aa4.15□□□□□ -1.74
TRIM4-205ENST00000496896 PIK3C2GO75747 1445 aa4.15□□□□□ -1.74
TRIM4-205ENST00000496896 TEX13CA0A0J9YWL9 993 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 TNPO2O14787 897 aaKnown RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 SEC14L5O43304 696 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 LMX1BO60663 402 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 TCEA1P23193 301 aaKnown RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 FASLGP48023 281 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 FUT6P51993 359 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 RPP30P78346 268 aaKnown RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 IRX6P78412 446 aaPredicted RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 BIRC3Q13489 604 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 KCNT1Q5JUK3 1230 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 OTUD3Q5T2D3 398 aaPredicted RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 STPG1Q5TH74 334 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 GGNBP1Q5YKI7 109 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 KCTD18Q6PI47 426 aaPredicted RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 WDR63Q8IWG1 891 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 APOPT1Q96IL0 206 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 LBHD1Q9BQE6 289 aaPredicted RBP4.15□□□□□ -1.75
TRIM4-205ENST00000496896 PLEKHA5Q9HAU0 1116 aa4.15□□□□□ -1.75
TRIM4-205ENST00000496896 MMP25Q9NPA2 562 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms