RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 PTPRRQ15256 657 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 TLR1Q15399 786 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PITRM1Q5JRX3 1037 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ANKS3Q6ZW76 656 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ST13P4Q8IZP2 240 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 LPCAT1Q8NF37 534 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 RAET1EQ8TD07 263 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 BCL7CQ8WUZ0 217 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 DLG3Q92796 817 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PEX13Q92968 403 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ASB9Q96DX5 294 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 BTBD9Q96Q07 612 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PSKH2Q96QS6 385 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SLC39A3Q9BRY0 314 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SLC25A23Q9BV35 468 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 IL1RL2Q9HB29 575 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 BPIFA1Q9NP55 256 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 NLE1Q9NVX2 485 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 CROTQ9UKG9 612 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 RNF112Q9ULX5 631 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 AK5Q9Y6K8 562 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 FRMPD3Q5JV73 1810 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 A0A0U1RQS6 177 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 KDELR3O43731 214 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 AOC2O75106 756 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 KLKB1P03952 638 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 RHOCP08134 193 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 LINC00032P0C843 101 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 NCF1P14598 390 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 POLE2P56282 527 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 GRB7Q14451 532 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 THEMIS2Q5TEJ8 643 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 CYP2R1Q6VVX0 501 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 FUNDC1Q8IVP5 155 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 TWIST2Q8WVJ9 160 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 LPGAT1Q92604 370 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 ATOH8Q96SQ7 321 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SEMA6AQ9H2E6 1030 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 TFB2MQ9H5Q4 396 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SYTL2Q9HCH5 934 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SEMA4BQ9NPR2 832 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 MRGBPQ9NV56 204 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 COMMD8Q9NX08 183 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 TAS2R13Q9NYV9 303 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SRRDQ9UH36 339 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 IKZF3Q9UKT9 509 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 BTRCQ9Y297 605 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 PRSS51A0A1B0GVH4 220 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 C2orf81A6NN90 581 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 C9JVG2 144 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 H3BNC9 293 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 ARVCFO00192 962 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SCAMP3O14828 347 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 HOXB8P17481 243 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 OR1D2P34982 312 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SUOXP51687 545 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 CYTH1Q15438 398 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 C5orf22Q49AR2 442 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 EFHBQ8N7U6 833 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 RHEBL1Q8TAI7 183 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 STAG3L4Q8TBR4 150 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 PRICKLE1Q96MT3 831 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 TRAPPC9Q96Q05 1148 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 SPAG4Q9NPE6 437 aa11.17□□□□□ -0.62
CHMP3-209ENST00000494623 GMPR2Q9P2T1 348 aaKnown RBP11.17□□□□□ -0.62
CHMP3-209ENST00000494623 A0A1B0GTL3 188 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 CDC7O00311 574 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 NR5A2O00482 541 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 COCHO43405 550 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 PRLP01236 227 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 FGF4P08620 206 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 GPX3P22352 226 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 CORO1AP31146 461 aaKnown RBP11.16□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF140P52738 457 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-209ENST00000494623 CHN2P52757 468 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 ECT2LQ008S8 904 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 SMARCB1Q12824 385 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 TSNQ15631 228 aaKnown RBP11.16□□□□□ -0.62
CHMP3-209ENST00000494623 PTPRNQ16849 979 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 TYSND1Q2T9J0 566 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 SETMARQ53H47 684 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-209ENST00000494623 HECTD3Q5T447 861 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 LHX8Q68G74 356 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 NAIF1Q69YI7 327 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-209ENST00000494623 UGT2A3Q6UWM9 527 aa11.16□□□□□ -0.62
CHMP3-209ENST00000494623 LINGO4Q6UY18 593 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms