RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FASLGP48023 281 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 ATP11AP98196 1134 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 FOXM1Q08050 763 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 NAA30Q147X3 362 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-222ENST00000491867 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 CPZQ66K79 652 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 JMJD6Q6NYC1 403 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-222ENST00000491867 LYSMD3Q7Z3D4 306 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 ZC3H18Q86VM9 953 aaKnown RBP13.79□□□□□ -0.2
ATG4B-222ENST00000491867 XYLT1Q86Y38 959 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 Q8NA96 180 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 C18orf8Q96DM3 657 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 TEX101Q9BY14 249 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 SLAMF7Q9NQ25 335 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 SIDT1Q9NXL6 827 aaKnown RBP13.79□□□□□ -0.2
ATG4B-222ENST00000491867 DNAJC12Q9UKB3 198 aa13.79□□□□□ -0.2
ATG4B-222ENST00000491867 ARHGAP10A1A4S6 786 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
ATG4B-222ENST00000491867 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-222ENST00000491867 MAPK9P45984 424 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 MTIF2P46199 727 aaKnown RBP13.78□□□□□ -0.2
ATG4B-222ENST00000491867 GABRB2P47870 512 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 NFATC2Q13469 925 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 NR6A1Q15406 480 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 DOK6Q6PKX4 331 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 DPPA4Q7L190 304 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 FAM71AQ8IYT1 594 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 TTC13Q8NBP0 860 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 NUS1Q96E22 293 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 ATP13A3Q9H7F0 1226 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 MLXIPLQ9NP71 852 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 PCDHGA9Q9Y5G4 932 aaKnown RBP13.78□□□□□ -0.2
ATG4B-222ENST00000491867 PCDHGA6Q9Y5G7 932 aa13.78□□□□□ -0.2
ATG4B-222ENST00000491867 ANKHD1Q8IWZ3 2542 aaKnown RBP13.78□□□□□ -0.2
ATG4B-222ENST00000491867 RASA4BC9J798 803 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 RASA4O43374 803 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 KRT86O43790 486 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 LRCH4O75427 683 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 KIAA0754O94854 1291 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 RECKO95980 971 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 IVLP07476 585 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 VARSP26640 1264 aaKnown RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 LEPRP48357 1165 aaKnown RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CCL11P51671 97 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 BPIFB4P59827 614 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CDK3Q00526 305 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CAMK4Q16566 473 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 CNTRLQ7Z7A1 2325 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 SFRP1Q8N474 314 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 PAF1Q8N7H5 531 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 TMEM35BQ8NCS4 154 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 ABCA2Q9BZC7 2435 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 UNKQ9C0B0 810 aaKnown RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 ACTL8Q9H568 366 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-222ENST00000491867 TMEM59LQ9UK28 342 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 SLC17A4Q9Y2C5 497 aa13.77□□□□□ -0.21
ATG4B-222ENST00000491867 GOLGA6CA6NDK9 693 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 NDUFA10O95299 355 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 CBX6O95503 412 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 EML2O95834 649 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 GOLGA6DP0CG33 693 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 NFKBIAP25963 317 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 SERPINA4P29622 427 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 GARSP41250 739 aaKnown RBP13.76□□□□□ -0.21
ATG4B-222ENST00000491867 RGRP47804 291 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 HHEXQ03014 270 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 CDO1Q16878 200 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 DPY19L2P1Q6NXN4 242 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 SRLQ86TD4 932 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 EMC1Q8N766 993 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 RTL3Q8N8U3 475 aaKnown RBP13.76□□□□□ -0.21
ATG4B-222ENST00000491867 CT55Q8WUE5 264 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 ECHDC3Q96DC8 303 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 ELMO2Q96JJ3 720 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 OR2M4Q96R27 311 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 PDCL3Q9H2J4 239 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 GOLGA6AQ9NYA3 693 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 LNPEPQ9UIQ6 1025 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 PADI1Q9ULC6 663 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 ZNF451Q9Y4E5 1061 aa13.76□□□□□ -0.21
ATG4B-222ENST00000491867 MDC1Q14676 2089 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms