RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 KLHL8Q9P2G9 620 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-214ENST00000490398 MOSPD1Q9UJG1 213 aa18.07■□□□□ 0.48
COL9A3-214ENST00000490398 AMFRQ9UKV5 643 aa18.07■□□□□ 0.48
COL9A3-214ENST00000490398 SHOC2Q9UQ13 582 aa18.07■□□□□ 0.48
COL9A3-214ENST00000490398 TMEM98Q9Y2Y6 226 aa18.07■□□□□ 0.48
COL9A3-214ENST00000490398 PLEKHM1Q9Y4G2 1056 aa18.07■□□□□ 0.48
COL9A3-214ENST00000490398 PCYT1BQ9Y5K3 369 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-214ENST00000490398 PRSS38A1L453 326 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 TRABD2BA6NFA1 517 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 AURKAO14965 403 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 CTSEP14091 401 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 ZNF30P17039 623 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 PTPN7P35236 360 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 CHRNA4P43681 627 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 GPR1P46091 355 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 BLKP51451 505 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 TARDBPQ13148 414 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL9A3-214ENST00000490398 ILKQ13418 452 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 DOK6Q6PKX4 331 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 PEX26Q7Z412 305 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 TMPRSS12Q86WS5 348 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 NRROSQ86YC3 692 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 GALNT15Q8N3T1 639 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-214ENST00000490398 KYQ8NBH2 561 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 MDM1Q8TC05 714 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 CARS2Q9HA77 564 aaKnown RBP18.06■□□□□ 0.48
COL9A3-214ENST00000490398 PHPT1Q9NRX4 125 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-214ENST00000490398 GULP1Q9UBP9 304 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 ZMIZ1Q9ULJ6 1067 aa18.06■□□□□ 0.48
COL9A3-214ENST00000490398 CNOT6Q9ULM6 557 aaKnown RBP18.06■□□□□ 0.48
COL9A3-214ENST00000490398 TCRBV7S2A1N4TA0A589 114 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 EME2A4GXA9 379 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-214ENST00000490398 FADS2P1A8MWK0 482 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 H7C0C1 242 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 TNFRSF10CO14798 259 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 INPP4BO15327 924 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 OPA1O60313 960 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 SLC4A1P02730 911 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 JUPP14923 745 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 KELP23276 732 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 TEAD1P28347 426 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ATP5OP48047 213 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 SPINT3P49223 89 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 WNT3AP56704 352 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ELOCQ15369 112 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 NR0B2Q15466 257 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 CCDC181Q5TID7 509 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ADAMTSL4Q6UY14 1074 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ZNF765Q7L2R6 523 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 PID1Q7Z2X4 250 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ATL2Q8NHH9 583 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ZCCHC14Q8WYQ9 949 aaKnown RBP18.05■□□□□ 0.48
COL9A3-214ENST00000490398 MRGPRX2Q96LB1 330 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 ADGRE3Q9BY15 652 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 RABGEF1Q9UJ41 708 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 SUFUQ9UMX1 484 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 SLC17A4Q9Y2C5 497 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 EFR3BQ9Y2G0 817 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 OAS3Q9Y6K5 1087 aaKnown RBP18.05■□□□□ 0.48
COL9A3-214ENST00000490398 BPTFQ12830 3046 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 CFAP47Q6ZTR5 3102 aa18.05■□□□□ 0.48
COL9A3-214ENST00000490398 HACD1B0YJ81 288 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 NDST3O95803 873 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 GNPDA1P46926 289 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 GSDMDP57764 484 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 EIF3EP60228 445 aaKnown RBP18.04■□□□□ 0.48
COL9A3-214ENST00000490398 XRCC4Q13426 336 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 OLIG2Q13516 323 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 SLC14A2Q15849 920 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 CDCP2Q5VXM1 449 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 MARK2Q7KZI7 788 aaKnown RBP18.04■□□□□ 0.48
COL9A3-214ENST00000490398 NLRP8Q86W28 1048 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 NRSN1Q8IZ57 195 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 SLC25A41Q8N5S1 370 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 GPR26Q8NDV2 337 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 HES6Q96HZ4 224 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 COX14Q96I36 57 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 FCRL5Q96RD9 977 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 KCTD5Q9NXV2 234 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 FAM153AQ9UHL3 310 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 GPR34Q9UPC5 381 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 DOLKQ9UPQ8 538 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 R3HDM2Q9Y2K5 976 aaKnown RBP18.04■□□□□ 0.48
COL9A3-214ENST00000490398 ZNF711Q9Y462 761 aa18.04■□□□□ 0.48
COL9A3-214ENST00000490398 GOLGA4Q13439 2230 aaKnown RBP18.04■□□□□ 0.48
COL9A3-214ENST00000490398 LOC285095A0A1B0GVY8 99 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 MT-CO3P00414 261 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 RBP3P10745 1247 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 AK4P27144 223 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-214ENST00000490398 SIRPB2Q5JXA9 342 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 ZNF648Q5T619 568 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-214ENST00000490398 HENMT1Q5T8I9 393 aaKnown RBP18.03■□□□□ 0.48
COL9A3-214ENST00000490398 ALS2CLQ60I27 953 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 TMC3Q7Z5M5 1100 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 TAF8Q7Z7C8 310 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 GKN2Q86XP6 184 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 DCBLD1Q8N8Z6 715 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 FAM83DQ9H4H8 585 aa18.03■□□□□ 0.48
COL9A3-214ENST00000490398 ZFYVE1Q9HBF4 777 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms