RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 SNAPC1Q16533 368 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ME3Q16798 604 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 KCNT1Q5JUK3 1230 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 DAB2IPQ5VWQ8 1189 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SEPT14Q6ZU15 432 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 PTCHD4Q6ZW05 846 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SLC4A11Q8NBS3 891 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ANKRD20A12PQ8NF67 263 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ST7LQ8TDW4 575 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 LPIN2Q92539 896 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 IP6K1Q92551 441 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 CEP295NLQ96MC4 621 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 UTP14AQ9BVJ6 771 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 DENND2DQ9H6A0 471 aaPredicted RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 INTS13Q9NVM9 706 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 APPL1Q9UKG1 709 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 ICKQ9UPZ9 632 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 PIN4Q9Y237 131 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.63□□□□□ -1.833e-13■■■□□ 18.8
HFM1-208ENST00000488023 INSL6Q9Y581 213 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 AP1M2Q9Y6Q5 423 aa3.63□□□□□ -1.83
HFM1-208ENST00000488023 SPAG9O60271 1321 aaKnown RBP3.63□□□□□ -1.83
HFM1-208ENST00000488023 SYCE3A1L190 88 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 HTR3EA5X5Y0 456 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CGB1A6NKQ9 187 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 ANXA2P2A6NMY6 339 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 VWC2LB2RUY7 222 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 FAM86B1E9PN63 330 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 SIX3O95343 332 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 IFNB1P01574 187 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 FAM86B2P0C5J1 330 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 OR52Z1P0C646 297 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 RFPL3SP0C7P2 107 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CTPS1P17812 591 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 HSPA4P34932 840 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 OAZ1P54368 228 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 PDE1AP54750 535 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CASP9P55211 416 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 SLC26A5P58743 744 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 WDR5P61964 334 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 YPEL5P62699 121 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 HTD2P86397 168 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CXCL9Q07325 125 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 PDK1Q15118 436 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 HIST2H2ACQ16777 129 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 PCGF3Q3KNV8 242 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CDONQ4KMG0 1287 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 TMEM211Q6ICI0 200 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 ANKRD16Q6P6B7 361 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 KCTD9Q7L273 389 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CENPVQ7Z7K6 275 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 ZER1Q7Z7L7 766 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 NOXA1Q86UR1 476 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 WDR63Q8IWG1 891 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 RTL3Q8N8U3 475 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 B3GALNT2Q8NCR0 500 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 MYCBPAPQ8TBZ2 947 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 GRAPLQ8TC17 118 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 CAGE1Q8TC20 777 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 SYAP1Q96A49 352 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 TRIM44Q96DX7 344 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 EDC3Q96F86 508 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 ADAD1Q96M93 576 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 SNX18Q96RF0 628 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 ANP32EQ9BTT0 268 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 ABHD14AQ9BUJ0 271 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 KRTAP1-5Q9BYS1 174 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 DNAJC18Q9H819 358 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 IARS2Q9NSE4 1012 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 TAS2R3Q9NYW6 316 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 IL19Q9UHD0 177 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 CCNL1Q9UK58 526 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 FBXW11Q9UKB1 542 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 FAM96BQ9Y3D0 163 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 ATAD2BQ9ULI0 1458 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 C1orf226A1L170 272 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 SLC25A17O43808 307 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 HEXBP07686 556 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 SRCP12931 536 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 EEF2P13639 858 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 CCNA2P20248 432 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 FPR3P25089 353 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 MATR3P43243 847 aaKnown RBP eCLIP3.62□□□□□ -1.836e-7■■■□□ 16.1
HFM1-208ENST00000488023 YWHAZP63104 245 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 HMGN5P82970 282 aaKnown RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 ADORA2A-AS1P86434 159 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 PPATQ06203 517 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 DMWDQ09019 674 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 TAZQ16635 292 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 PROSER3Q2NL68 480 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 MYLK3Q32MK0 819 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 TOR1AIP1Q5JTV8 583 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 AADACL2Q6P093 401 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 TEX38Q6PEX7 206 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 FBXO46Q6PJ61 603 aaPredicted RBP3.62□□□□□ -1.83
HFM1-208ENST00000488023 OLFM4Q6UX06 510 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 Q6ZNX1 250 aa3.62□□□□□ -1.83
HFM1-208ENST00000488023 QSOX2Q6ZRP7 698 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms