RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PTPN4P29074 926 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 GNA15P30679 374 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 CDK3Q00526 305 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 HHEXQ03014 270 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 MEA1Q16626 185 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 ANO6Q4KMQ2 910 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 AFMIDQ63HM1 303 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 TRIM74Q86UV6 250 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 FJX1Q86VR8 437 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
U2AF1-211ENST00000486519 UBE2Q2Q8WVN8 375 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 C9orf72Q96LT7 481 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 COQ10AQ96MF6 247 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 SMAD5Q99717 465 aaKnown RBP15.1■□□□□ 0.01
U2AF1-211ENST00000486519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
U2AF1-211ENST00000486519 SLC17A4Q9Y2C5 497 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 TMEM98Q9Y2Y6 226 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 TRIM49BA6NDI0 452 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 BECN2A8MW95 431 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 C21orf140B9A014 251 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 KIF1CO43896 1103 aaKnown RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 NADKO95544 446 aaPredicted RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 IVLP07476 585 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 PLEKP08567 350 aaPredicted RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 CCNYL3P0C7X3 344 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 TNFAIP3P21580 790 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 PTGER4P35408 488 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 FLT3P36888 993 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 GEMIN4P57678 1058 aaKnown RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 GCNT1Q02742 428 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 ACOX1Q15067 660 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 PTPRRQ15256 657 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 RWDD4Q6NW29 188 aaKnown RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 MARK2Q7KZI7 788 aaKnown RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 BNIPLQ7Z465 357 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 ST6GALNAC3Q8NDV1 305 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 OR2M4Q96R27 311 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 PLCB1Q9NQ66 1216 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 PHPT1Q9NRX4 125 aaPredicted RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 B3GNT3Q9Y2A9 372 aa15.09■□□□□ 0.01
U2AF1-211ENST00000486519 COPG1Q9Y678 874 aaKnown RBP15.09■□□□□ 0.01
U2AF1-211ENST00000486519 SLC16A3O15427 465 aaKnown RBP15.08■□□□□ 0
U2AF1-211ENST00000486519 MED7O43513 233 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 RAMP2O60895 175 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 C9P02748 559 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 FGF5P12034 268 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 PFKFB1P16118 471 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 CA5AP35218 305 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 ME1P48163 572 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 C8orf34Q49A92 452 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 LCN10Q6JVE6 187 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 GJB7Q6PEY0 223 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 RFLNAQ6ZTI6 216 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 DPPA4Q7L190 304 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 SYVN1Q86TM6 617 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 KCNMB4Q86W47 210 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 NUS1Q96E22 293 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 SCARF2Q96GP6 870 aaPredicted RBP15.08■□□□□ 0
U2AF1-211ENST00000486519 TGM7Q96PF1 710 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 MAGEH1Q9H213 219 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 RUBCNLQ9H714 662 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 PPP4R2Q9NY27 417 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 GPR83Q9NYM4 423 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 PRKAB1Q9Y478 270 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 CSAG2Q9Y5P2 127 aa15.08■□□□□ 0
U2AF1-211ENST00000486519 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 A0A0U1RQS6 177 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 CFAP69A5D8W1 941 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 PDE2AO00408 941 aaPredicted RBP15.07■□□□□ 0
U2AF1-211ENST00000486519 TMEM63AO94886 807 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 TYRP1P17643 537 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 ETFBP38117 255 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 MAPKAPK2P49137 400 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 PER3P56645 1201 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 PYCR3Q53H96 274 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 TMCO4Q5TGY1 634 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 PWWP2BQ6NUJ5 590 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 BRAT1Q6PJG6 821 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 CUZD1Q86UP6 607 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 ZNF354CQ86Y25 554 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 HCAR2Q8TDS4 363 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 ITLN2Q8WWU7 325 aaPredicted RBP15.07■□□□□ 0
U2AF1-211ENST00000486519 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 ZBTB20Q9HC78 741 aaPredicted RBP15.07■□□□□ 0
U2AF1-211ENST00000486519 SARS2Q9NP81 518 aaKnown RBP15.07■□□□□ 0
U2AF1-211ENST00000486519 TBC1D29Q9UFV1 150 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 ARMCX3Q9UH62 379 aaPredicted RBP15.07■□□□□ 0
U2AF1-211ENST00000486519 PCDHGA10Q9Y5H3 936 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 SLC30A1Q9Y6M5 507 aa15.07■□□□□ 0
U2AF1-211ENST00000486519 MASP2O00187 686 aa15.06■□□□□ 0
U2AF1-211ENST00000486519 SOD1P00441 154 aa15.06■□□□□ 0
U2AF1-211ENST00000486519 RHOQP17081 205 aa15.06■□□□□ 0
U2AF1-211ENST00000486519 LPOP22079 712 aaPredicted RBP15.06■□□□□ 0
U2AF1-211ENST00000486519 ERCC5P28715 1186 aaPredicted RBP15.06■□□□□ 0
U2AF1-211ENST00000486519 GLRBP48167 497 aa15.06■□□□□ 0
U2AF1-211ENST00000486519 APBA1Q02410 837 aa15.06■□□□□ 0
U2AF1-211ENST00000486519 IL11RAQ14626 422 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms