RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 KATNAL2Q8IYT4 538 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 CCDC74AQ96AQ1 378 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 BAG1Q99933 345 aaPredicted RBP17.6■□□□□ 0.41
COL6A1-204ENST00000486023 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 LRRK1Q38SD2 2015 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 AGRPO00253 132 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 MT-CYBP00156 380 aaPredicted RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 FUCA1P04066 466 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 PTPN3P26045 913 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 AK4P27144 223 aaPredicted RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 STC1P52823 247 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 RPL26P61254 145 aaKnown RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 TEX44Q53QW1 395 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 CDCP2Q5VXM1 449 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 C11orf63Q6NUN7 778 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 CCHCR1Q8TD31 782 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 NAT6Q93015 286 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 IMP4Q96G21 291 aaKnown RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 NRSN2Q9GZP1 204 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 C10orf88Q9H8K7 445 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 GLOD4Q9HC38 313 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 DNPEPQ9ULA0 475 aa17.59■□□□□ 0.41
COL6A1-204ENST00000486023 RPL26L1Q9UNX3 145 aaKnown RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 REXO2Q9Y3B8 237 aaKnown RBP17.59■□□□□ 0.41
COL6A1-204ENST00000486023 DSPP15924 2871 aaKnown RBP17.58■□□□□ 0.41
COL6A1-204ENST00000486023 hCG_1818297A0A087WSY0 165 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 BRINP1O60477 761 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 CCL7P80098 99 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 DPTQ07507 201 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 ILF3Q12906 894 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL6A1-204ENST00000486023 BIRC2Q13490 618 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 SPIDRQ14159 915 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 ALS2CLQ60I27 953 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 SLC30A9Q6PML9 568 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 LYSMD3Q7Z3D4 306 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 SDR16C5Q8N3Y7 309 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 EXD1Q8NHP7 514 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 ATXN7L3BQ96GX2 97 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 HIC2Q96JB3 615 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-204ENST00000486023 LACRTQ9GZZ8 138 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 SPATS2LQ9NUQ6 558 aaKnown RBP17.58■□□□□ 0.4
COL6A1-204ENST00000486023 PKD2L2Q9NZM6 624 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 KLHL8Q9P2G9 620 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-204ENST00000486023 RABGEF1Q9UJ41 708 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 PLEKHM1Q9Y4G2 1056 aa17.58■□□□□ 0.4
COL6A1-204ENST00000486023 ANKRD11Q6UB99 2663 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-204ENST00000486023 ZFHX4Q86UP3 3567 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 H7C0C1 242 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 SOD1P00441 154 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ATP1A1P05023 1023 aaKnown RBP17.57■□□□□ 0.4
COL6A1-204ENST00000486023 NFKB1P19838 968 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ATP5OP48047 213 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 GABREP78334 506 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 CDK18Q07002 472 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 PRKD1Q15139 912 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-204ENST00000486023 TAZQ16635 292 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ISXQ2M1V0 245 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 C3orf38Q5JPI3 329 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ADAMTSL4Q6UY14 1074 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 RBM44Q6ZP01 1051 aaKnown RBP17.57■□□□□ 0.4
COL6A1-204ENST00000486023 PID1Q7Z2X4 250 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 NRSN1Q8IZ57 195 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 KIAA1524Q8TCG1 905 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 TEKT5Q96M29 485 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 DESI2Q9BSY9 194 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 GSDMCQ9BYG8 508 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 GPR63Q9BZJ6 419 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 FAM83DQ9H4H8 585 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ZFYVE1Q9HBF4 777 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ARFGAP3Q9NP61 516 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 ZNHIT2Q9UHR6 403 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 PRKAB1Q9Y478 270 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 CFAP47Q6ZTR5 3102 aa17.57■□□□□ 0.4
COL6A1-204ENST00000486023 KNTC1P50748 2209 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 TRBV23OR9-2A0A075B6M9 112 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 RPLP0P05388 317 aaKnown RBP17.56■□□□□ 0.4
COL6A1-204ENST00000486023 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
COL6A1-204ENST00000486023 CTNNA2P26232 953 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 ADCY8P40145 1251 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 TNNT3P45378 269 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-204ENST00000486023 SPINT3P49223 89 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 VAV2P52735 878 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 CTBSQ01459 385 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 RTP5Q14D33 572 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 COL28A1Q2UY09 1125 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 ZNF765Q7L2R6 523 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 CACTIN-AS1Q8N1I8 211 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 SLC25A41Q8N5S1 370 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 ZDHHC1Q8WTX9 485 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 HTR3CQ8WXA8 447 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 NAF1Q96HR8 494 aaKnown RBP17.56■□□□□ 0.4
COL6A1-204ENST00000486023 FAM118BQ9BPY3 351 aa17.56■□□□□ 0.4
COL6A1-204ENST00000486023 TAAR2Q9P1P5 351 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms