RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FAXCQ5TGI0 409 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 KCTD16Q68DU8 428 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 RAET1GQ6H3X3 334 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 CCDC70Q6NSX1 233 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 NYAP1Q6ZVC0 841 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 KDELC2Q7Z4H8 507 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 TMC3Q7Z5M5 1100 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 OR1E3Q8WZA6 343 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 SCAMP4Q969E2 229 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 TSACCQ96A04 125 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-225ENST00000483506 RTP4Q96DX8 246 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 PDXPQ96GD0 296 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 PPP1R2P1Q96PQ5 205 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 WDR24Q96S15 920 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 TLR10Q9BXR5 811 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 FRMD8Q9BZ67 464 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-225ENST00000483506 CLPBQ9H078 707 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 CDH19Q9H159 772 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 TRABDQ9H4I3 376 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 CD84Q9UIB8 345 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 ANGPTL2Q9UKU9 493 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 ZNF711Q9Y462 761 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 CHD8Q9HCK8 2581 aa17.94■□□□□ 0.46
HDAC6-225ENST00000483506 LY6G6EA0A0G2JKS1 128 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 FGF1P05230 155 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 CDK4P11802 303 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 CKMT1AP12532 417 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 CKMT2P17540 419 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 ADRA1AP35348 466 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 GPR1P46091 355 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 GEMP55040 296 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 DNAJC3Q13217 504 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 ELOCQ15369 112 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 SLC1A5Q15758 541 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 SIRPB2Q5JXA9 342 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 ZCCHC8Q6NZY4 707 aaKnown RBP17.93■□□□□ 0.46
HDAC6-225ENST00000483506 LVRNQ6Q4G3 990 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 HID1Q8IV36 788 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 CCDC110Q8TBZ0 833 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 LMX1AQ8TE12 382 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 ANP32BQ92688 251 aaKnown RBP17.93■□□□□ 0.46
HDAC6-225ENST00000483506 SCARF2Q96GP6 870 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-225ENST00000483506 COX14Q96I36 57 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 RIOK2Q9BVS4 552 aaKnown RBP17.93■□□□□ 0.46
HDAC6-225ENST00000483506 BOCQ9BWV1 1114 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 RAD18Q9NS91 495 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 SLC17A4Q9Y2C5 497 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 AAR2Q9Y312 384 aaKnown RBP17.93■□□□□ 0.46
HDAC6-225ENST00000483506 SPO11Q9Y5K1 396 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 U3KQA8 63 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 PTPRBP23467 1997 aa17.93■□□□□ 0.46
HDAC6-225ENST00000483506 PRSS38A1L453 326 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 TNFP01375 233 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 CEACAM5P06731 702 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 PIRTP0C851 137 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 PSMB4P28070 264 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 OASLQ15646 514 aaKnown RBP17.92■□□□□ 0.46
HDAC6-225ENST00000483506 REXO1L1PQ8IX06 675 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 IPMKQ8NFU5 416 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 APOLD1Q96LR9 279 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 AGAP2Q99490 1192 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 FAM83DQ9H4H8 585 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 NCKIPSDQ9NZQ3 722 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 HACD3Q9P035 362 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 SHOC2Q9UQ13 582 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 NEUROG3Q9Y4Z2 214 aa17.92■□□□□ 0.46
HDAC6-225ENST00000483506 ACACBO00763 2458 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 F5H423 210 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 YY2O15391 372 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 LIASO43766 372 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 HYAL3O43820 417 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 RFPL3O75679 317 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 TOP3BO95985 862 aaKnown RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 HMGCLP35914 325 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 TNNT3P45378 269 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 C1orf61Q13536 156 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 PRPSAP1Q14558 356 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 SIX1Q15475 284 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 C6orf132Q5T0Z8 1188 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 RANBP10Q6VN20 620 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 TTC30BQ8N4P2 665 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 CHCHD4Q8N4Q1 142 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 FAM71DQ8N9W8 422 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 HIC2Q96JB3 615 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 FSD1LQ9BXM9 530 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 GPR63Q9BZJ6 419 aa17.91■□□□□ 0.46
HDAC6-225ENST00000483506 MRPL40Q9NQ50 206 aaKnown RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 CNOT6Q9ULM6 557 aaKnown RBP17.91■□□□□ 0.46
HDAC6-225ENST00000483506 TPRP12270 2363 aaKnown RBP17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GOLGA6CA6NDK9 693 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 GOLGA6BA6NDN3 693 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 FADS2P1A8MWK0 482 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 AURKAO14965 403 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 ZSCAN12O43309 604 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 FUCA1P04066 466 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 IVLP07476 585 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 ANXA6P08133 673 aa17.9■□□□□ 0.46
HDAC6-225ENST00000483506 CELA2BP08218 269 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms