RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	CCKBR	P32239	447 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	PEX5	P50542	639 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	RAD23B	P54727	409 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	TUBA1B	P68363	451 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	NFATC4	Q14934	902 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	NAB2	Q15742	525 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	ZSCAN23	Q3MJ62	389 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	ATP13A5	Q4VNC0	1218 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	LRIF1	Q5T3J3	769 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	ITPRIPL1	Q6GPH6	555 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	KCTD18	Q6PI47	426 aa	Predicted RBP	4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	SEPT14	Q6ZU15	432 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	ZNF114	Q8NC26	417 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	OR2AK2	Q8NG84	335 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	NUDCD2	Q8WVJ2	157 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	SH3GL2	Q99962	352 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	SDF4	Q9BRK5	362 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	IL25	Q9H293	177 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	SEBOX	Q9HB31	216 aa	Predicted RBP	4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	HAUS2	Q9NVX0	235 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	MTMR6	Q9Y217	621 aa		4.25	□□□□□ -1.73
RBM39-231	ENST00000477334	IGLV5-37	A0A075B6J1	123 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	FRMD3	A2A2Y4	597 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GTPBP1	O00178	669 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	JRK	O75564	520 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE7	O76087	117 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	KDM4B	O94953	1096 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	AFP	P02771	609 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CLTB	P09497	229 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE12F	P0CL80	117 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE12G	P0CL81	117 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE12I	P0CL82	117 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SRC	P12931	536 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	MCM3	P25205	808 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	TKT	P29401	623 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	TM4SF1	P30408	202 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CCKAR	P32238	428 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	DRG2	P55039	364 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	HNRNPH2	P55795	449 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SEC61A1	P61619	476 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CSNK2A1	P68400	391 aa	Predicted RBP	4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	PRAME	P78395	509 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE1	Q13065	139 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GAGE4	Q13068	117 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CRYM	Q14894	314 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	2e-62	■■■■■ 27
RBM39-231	ENST00000477334	CALCRL	Q16602	461 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	FAM205BP	Q63HN1	556 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	NADSYN1	Q6IA69	706 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	RGMB	Q6NW40	437 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	TMEM154	Q6P9G4	183 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SARM1	Q6SZW1	724 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CACNA2D4	Q7Z3S7	1137 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	ADHFE1	Q8IWW8	467 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SMRP1	Q8NCR6	262 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CSNK2A3	Q8NEV1	391 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	HMGCLL1	Q8TB92	370 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SGCD	Q92629	289 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	ORAI1	Q96D31	301 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	ELMOD3	Q96FG2	381 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	GRAMD2B	Q96HH9	432 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	CMKLR1	Q99788	373 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	SPRY4	Q9C004	299 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	MALT1	Q9UDY8	824 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	TAF1	P21675	1872 aa		4.24	□□□□□ -1.73
RBM39-231	ENST00000477334	ATP2A1	O14983	1001 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	HCRTR2	O43614	444 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	UBA7	P41226	1012 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	GARS	P41250	739 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	NAP1L1	P55209	391 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	CDH8	P55286	799 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	SEC61B	P60468	96 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	FOXM1	Q08050	763 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	KIF5A	Q12840	1032 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	DLG1	Q12959	904 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	GRIK2	Q13002	908 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	SLC39A14	Q15043	492 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	OASL	Q15646	514 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	KLHL22	Q53GT1	634 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	WDR78	Q5VTH9	848 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	ZNF280D	Q6N043	979 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	MZT2B	Q6NZ67	158 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	KRBA2	Q6ZNG9	492 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	CLEC17A	Q6ZS10	378 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	CHST9	Q7L1S5	443 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	CHERP	Q8IWX8	916 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	SRBD1	Q8N5C6	995 aa	Known RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	WFIKKN2	Q8TEU8	576 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	TANK	Q92844	425 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	APBB2	Q92870	758 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	RTP4	Q96DX8	246 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	ADGRG7	Q96K78	797 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	NCAPG	Q9BPX3	1015 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	TREX2	Q9BQ50	279 aa	Predicted RBP	4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	GHITM	Q9H3K2	345 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	PIGM	Q9H3S5	423 aa		4.23	□□□□□ -1.73
RBM39-231	ENST00000477334	SETD4	Q9NVD3	440 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms