RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MECRQ9BV79 373 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 THAP2Q9H0W7 228 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 OSGEPL1Q9H4B0 414 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CD320Q9NPF0 282 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GPR108Q9NPR9 543 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 FSCN3Q9NQT6 498 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 KLC4Q9NSK0 619 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 FAM212BQ9NTI7 297 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 ARL8BQ9NVJ2 186 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 DNAJC17Q9NVM6 304 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HDAC6Q9UBN7 1215 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CDH22Q9UJ99 828 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CNOT11Q9UKZ1 510 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 ZDHHC8Q9ULC8 765 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GABRQQ9UN88 632 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 NEU2Q9Y3R4 380 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PCDHB2Q9Y5E7 798 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ENTPD2Q9Y5L3 495 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ROCK1Q13464 1354 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 COL5A2P05997 1499 aaPredicted RBP6.02□□□□□ -1.44
RTF1-203ENST00000473214 WDR90Q96KV7 1748 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 PIK3C2GO75747 1445 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 LOC100509620A0A075B734 347 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 C5orf51A6NDU8 294 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ZNF879B4DU55 563 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 E9PI62 339 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 RBAK-RBAKDNI3L0D1 243 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 LDLRAD4O15165 306 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SPRY1O43609 319 aaPredicted RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 TAF5LO75529 589 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 NTRK1P04629 796 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SERPING1P05155 500 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 GNAI3P08754 354 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 FAM58BPP0C7Q3 252 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 GCFC2P16383 781 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 TNFRSF1AP19438 455 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ITIH1P19827 911 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 DDCP20711 480 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CHMLP26374 656 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 PTPN4P29074 926 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ARHGAP25P42331 645 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CDK7P50613 346 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CLCNKBP51801 687 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CTSWP56202 376 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ACTR3P61158 418 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 GNAI1P63096 354 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 TPM4P67936 248 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 NOP14P78316 857 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 MRPS15P82914 257 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 DNAJC3Q13217 504 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 NOLC1Q14978 699 aaKnown RBP eCLIP6.02□□□□□ -1.45
RTF1-203ENST00000473214 KCNA10Q16322 511 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ZSCAN26Q16670 478 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 DPCR1Q3MIW9 517 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 UBAP2Q5T6F2 1119 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 CDKAL1Q5VV42 579 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 C6orf89Q6UWU4 347 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CES3Q6UWW8 571 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 C15orf39Q6ZRI6 1047 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 MTSS1LQ765P7 747 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 RRM2BQ7LG56 351 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SYVN1Q86TM6 617 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CUZD1Q86UP6 607 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ZNF573Q86YE8 665 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SRRM1Q8IYB3 904 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 BATF2Q8N1L9 274 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SLC43A2Q8N370 569 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 MFSD4AQ8N468 514 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ARFGAP2Q8N6H7 521 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ENDOVQ8N8Q3 282 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 KCNH5Q8NCM2 988 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CCNYQ8ND76 341 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 MCUQ8NE86 351 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 DBF4BQ8NFT6 615 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 STARD8Q92502 1023 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CCDC120Q96HB5 630 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 KLHL15Q96M94 604 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 NSMCE2Q96MF7 247 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 C5orf34Q96MH7 638 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 FOXB1Q99853 325 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 MTG1Q9BT17 334 aaPredicted RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 OSBPL8Q9BZF1 889 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 RTN4RQ9BZR6 473 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 XYLT2Q9H1B5 865 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 SLC25A32Q9H2D1 315 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 EPB41L4BQ9H329 900 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 LDAHQ9H6V9 325 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 BARX1Q9HBU1 254 aaPredicted RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 TUFT1Q9NNX1 390 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 TMEM140Q9NV12 185 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 FAM118AQ9NWS6 357 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 P4HTMQ9NXG6 502 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 WSB2Q9NYS7 404 aaPredicted RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 MARCH2Q9P0N8 246 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 CAPN11Q9UMQ6 739 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ASB1Q9Y576 335 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms