RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PTGS2P35354 604 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 KRT9P35527 623 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 HTR3AP46098 478 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 STT3AP46977 705 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 BCAT1P54687 386 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 GCNT1Q02742 428 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TP53BP2Q13625 1128 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 RAPGEF1Q13905 1077 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 PREPLQ4J6C6 727 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TIGD2Q4W5G0 525 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TMEM31Q5JXX7 168 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TMEM270Q6UE05 265 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CD300LGQ6UXG3 332 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 MICALCLQ6ZW33 695 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 RSRC2Q7L4I2 434 aaKnown RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CACNA2D4Q7Z3S7 1137 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 DNAJB7Q7Z6W7 309 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 MRGPREQ86SM8 312 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 SRLQ86TD4 932 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ARHGEF19Q8IW93 802 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ZC3H3Q8IXZ2 948 aaKnown RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 NUP93Q8N1F7 819 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 OR2C3Q8N628 320 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ZNF397Q8NF99 534 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CCDC26Q8TAB7 109 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 GPT2Q8TD30 523 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 DEPDC1BQ8WUY9 529 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 OVCA2Q8WZ82 227 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 FGF13Q92913 245 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 SMARCD2Q92925 531 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 FBXO32Q969P5 355 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TMEM125Q96AQ2 219 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 PCED1BQ96HM7 432 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 SGCZQ96LD1 299 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CCDC138Q96M89 665 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 MOGAT1Q96PD6 335 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 SPAG5Q96R06 1193 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 MRPL45Q9BRJ2 306 aaKnown RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TRMT61BQ9BVS5 477 aaKnown RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 INTS2Q9H0H0 1204 aaKnown RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CHST8Q9H2A9 424 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 NDST4Q9H3R1 872 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 TASP1Q9H6P5 420 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 LRRC4Q9HBW1 653 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 UBE2TQ9NPD8 197 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-208ENST00000469585 CISHQ9NSE2 258 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 FAM49BQ9NUQ9 324 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 EPS15L1Q9UBC2 864 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 MYO7AQ13402 2215 aa6.48□□□□□ -1.37
PTCD3-208ENST00000469585 ANK1P16157 1881 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 UNC119BA6NIH7 251 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SLC38A8A6NNN8 435 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 F8VP50 259 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SLC9A3R1O14745 358 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 ZNF263O14978 683 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 PEX14O75381 377 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SEC24AO95486 1093 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 VNN1O95497 513 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MT-ND5P03915 603 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SETSIPP0DME0 302 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 VDRP11473 427 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 TNFSF4P23510 183 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 GATA3P23771 443 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LMO2P25791 158 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CDH8P55286 799 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MAP3K7CLP57077 242 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LOXL3P58215 753 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 UBXN1Q04323 297 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SIGLEC14Q08ET2 396 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 INCA1Q0VD86 236 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 BST2Q10589 180 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 BRD3Q15059 726 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LSM12Q3MHD2 195 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 ZIK1Q3SY52 487 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CBWD6Q4V339 395 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 TCP11X2Q5H9J9 407 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CBWD3Q5JTY5 395 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CBWD5Q5RIA9 395 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SPOPLQ6IQ16 392 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 FAM171BQ6P995 826 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 ZDHHC24Q6UX98 284 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 TOGARAM2Q6ZUX3 1019 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 LIX1LQ8IVB5 337 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CCDC117Q8IWD4 279 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 CRYBG2Q8N1P7 616 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 FAM109AQ8N4B1 249 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SLC2A14Q8TDB8 520 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 IPO4Q8TEX9 1081 aaKnown RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 RNF139Q8WU17 664 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SNX19Q92543 992 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SPSB4Q96A44 273 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 ELSPBP1Q96BH3 223 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 ZNF707Q96C28 371 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MCRS1Q96EZ8 462 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 MSANTD3Q96H12 275 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 SNX22Q96L94 193 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 PRRX2Q99811 253 aa6.47□□□□□ -1.37
PTCD3-208ENST00000469585 NLRC4Q9NPP4 1024 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms