RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SLC35B2Q8TB61 432 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 SCFD1Q8WVM8 642 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 KCNE4Q8WWG9 221 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 RFFLQ8WZ73 363 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 SNX19Q92543 992 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 ERLEC1Q96DZ1 483 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 CNDP2Q96KP4 475 aaKnown RBP4.33□□□□□ -1.72
SSR3-204ENST00000467733 SPATA17Q96L03 361 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 CEP295NLQ96MC4 621 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 ZNF560Q96MR9 790 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 ZNF578Q96N58 590 aaPredicted RBP4.33□□□□□ -1.72
SSR3-204ENST00000467733 DPH1Q9BZG8 443 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 TMEM60Q9H2L4 133 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 LDAHQ9H6V9 325 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 TM9SF3Q9HD45 589 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 SPHK2Q9NRA0 654 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 GJB4Q9NTQ9 266 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 DNAJC17Q9NVM6 304 aaKnown RBP4.33□□□□□ -1.72
SSR3-204ENST00000467733 TUBD1Q9UJT1 453 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 C2CD2Q9Y426 696 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
SSR3-204ENST00000467733 PCDHGA8Q9Y5G5 932 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 PCDHGA7Q9Y5G6 932 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 PCDHGA6Q9Y5G7 932 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 PCDHGA3Q9Y5H0 932 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 RAD54BQ9Y620 910 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 SLCO1B1Q9Y6L6 691 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 RP1P56715 2156 aa4.33□□□□□ -1.72
SSR3-204ENST00000467733 NF1P21359 2839 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 MTORP42345 2549 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 A0A1B0GTQ1 180 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CLEC18AA5D8T8 446 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ZNF840PA6NDX5 716 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 KPNA7A9QM74 516 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 PRRT4C9JH25 899 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 K7ENP7 123 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 HNRNPDLO14979 420 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 YKT6O15498 198 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 KLK10O43240 276 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 DTNBO60941 627 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 MATN4O95460 622 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 AFPP02771 609 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 MBL2P11226 248 aaPredicted RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 DDCP20711 480 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 PCSK1P29120 753 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CDC25AP30304 524 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CCT6AP40227 531 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 PNPLA4P41247 253 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CCR10P46092 362 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 PPP3CCP48454 512 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 LIG4P49917 911 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ZNF132P52740 706 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CACNA2D1P54289 1103 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ERVPABLB-1P60509 514 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 NOP14P78316 857 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 MYL7Q01449 175 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 KCNT1Q5JUK3 1230 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 KIAA1614Q5VZ46 1190 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ZNF529Q6P280 563 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 INO80CQ6PI98 192 aaPredicted RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 LAYNQ6UX15 382 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 VSTM1Q6UX27 236 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CLEC18BQ6UXF7 455 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 DENND5BQ6ZUT9 1274 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 GATAD2AQ86YP4 633 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 BBS7Q8IWZ6 715 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 LSMEM2Q8N112 164 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 TMEM86AQ8N2M4 240 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 PDCL2Q8N4E4 241 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 CLEC18CQ8NCF0 446 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 SIPA1Q96FS4 1042 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 BICD1Q96G01 975 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ZNF274Q96GC6 653 aaPredicted RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 ACBD6Q9BR61 282 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 NTPCRQ9BSD7 190 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 NUP58Q9BVL2 599 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 TIPINQ9BVW5 301 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 C1QTNF7Q9BXJ2 289 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 SLC29A3Q9BZD2 475 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ITM2CQ9NQX7 267 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 STARD5Q9NSY2 213 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 DDX43Q9NXZ2 648 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 EHD2Q9NZN4 543 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 L1RE1Q9UN81 338 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 RUVBL1Q9Y265 456 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 SIK3Q9Y2K2 1263 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 SNX14Q9Y5W7 946 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 ARHGEF17Q96PE2 2063 aaPredicted RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 DOCK9Q9BZ29 2069 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 LRRK1Q38SD2 2015 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 HIVEP3Q5T1R4 2406 aa4.32□□□□□ -1.72
SSR3-204ENST00000467733 SPENQ96T58 3664 aaKnown RBP4.32□□□□□ -1.72
SSR3-204ENST00000467733 PDZD2O15018 2839 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 MED13Q9UHV7 2174 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
SSR3-204ENST00000467733 PTPRJQ12913 1337 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms