RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC27A1Q6PCB7 646 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 BLOC1S3Q6QNY0 202 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 RPS27LQ71UM5 84 aaKnown RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 ARMCX2Q7L311 632 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 PROSER1Q86XN7 944 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 IPMKQ8NFU5 416 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 ABHD11Q8NFV4 315 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 SPATA22Q8NHS9 363 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 MAGEE2Q8TD90 523 aaPredicted RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 ZC3H15Q8WU90 426 aaKnown RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 HDAC2Q92769 488 aaKnown RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 COPS5Q92905 334 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 PHF21BQ96EK2 531 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 SH3YL1Q96HL8 342 aaPredicted RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 BTN2A3PQ96KV6 586 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 KCTD14Q9BQ13 255 aaPredicted RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 BEGAINQ9BUH8 593 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 LHPPQ9H008 270 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 ALG2Q9H553 416 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 IL1RL2Q9HB29 575 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 HMG20AQ9NP66 347 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 HPS4Q9NQG7 708 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 TLR9Q9NR96 1032 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 TMEM45AQ9NWC5 275 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 SCHIP1Q9P0W5 487 aaPredicted RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 DAPK2Q9UIK4 370 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 GIT1Q9Y2X7 761 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 DNAJC15Q9Y5T4 150 aa7.29□□□□□ -1.24
USP48-206ENST00000464577 COL4A4P53420 1690 aaPredicted RBP7.29□□□□□ -1.24
USP48-206ENST00000464577 CROCCQ5TZA2 2017 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PDCD11Q14690 1871 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ATP6AP2A0A1C7CYW4 349 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 A0A1W2PP18 115 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 GRXCR2A6NFK2 248 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 AURKAO14965 403 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 AZIN1O14977 448 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SPTLC1O15269 473 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SYNCRIPO60506 623 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 TULP3O75386 442 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EEDO75530 441 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ATP6AP2O75787 350 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SUPT7LO94864 414 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 LRIG2O94898 1065 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PAPSS2O95340 614 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 SLC25A27O95847 323 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MT-CO1P00395 513 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 LGALS2P05162 132 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TXNP10599 105 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 CDH1P12830 882 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SHMT2P34897 504 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 OPRL1P41146 370 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 YAP1P46937 504 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 CXCR3P49682 368 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 NDUFV1P49821 464 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TAF6P49848 677 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MLLT10P55197 1068 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 OCA2Q04671 838 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 LIPEQ05469 1076 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EPS8Q12929 822 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 DAG1Q14118 895 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TTLL4Q14679 1199 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PLCL1Q15111 1095 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 AGAP7PQ5VUJ5 663 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CLEC20AQ6ZU45 233 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PAQR9Q6ZVX9 377 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 FKBP9P1Q75LS8 142 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SPATA19Q7Z5L4 167 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 OSTM1Q86WC4 334 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 RNF135Q8IUD6 432 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 FBXO16Q8IX29 292 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 RIMKLAQ8IXN7 391 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TMCO5AQ8N6Q1 288 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TWIST2Q8WVJ9 160 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 S100ZQ8WXG8 99 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CASP10Q92851 521 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 FKBP10Q96AY3 582 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EFHD2Q96C19 240 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 VMP1Q96GC9 406 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CSF3RQ99062 836 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 HEPHQ9BQS7 1158 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 COLEC11Q9BWP8 271 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EIF2AQ9BY44 585 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ULBP1Q9BZM6 244 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 AKIP1Q9NQ31 210 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CNGB3Q9NQW8 809 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 DDIT4Q9NX09 232 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 GJD2Q9UKL4 321 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 OAS3Q9Y6K5 1087 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 EVPLQ92817 2033 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MYLKQ15746 1914 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PIP5K1BO14986 540 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PEX10O60683 326 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 HUS1O60921 280 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 BEST1O76090 585 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms