RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 MRPS6P82932 125 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PFKPQ01813 784 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 TMEM44Q2T9K0 475 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CPTPQ5TA50 214 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 GAS2L1Q99501 681 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 COMMD4Q9H0A8 199 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 EPB41L1Q9H4G0 881 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 GPATCH2LQ9NWQ4 482 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 RABL2AQ9UBK7 228 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CASRP41180 1078 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PUS10Q3MIT2 529 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 GJB7Q6PEY0 223 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 C17orf64Q86WR6 236 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ANKFN1Q8N957 763 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 AKAP1Q92667 903 aaKnown RBP eCLIP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 LRRC19Q9H756 370 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CD320Q9NPF0 282 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 OR12D3Q9UGF7 316 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PIGBOS1A0A0B4J2F0 54 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 A0A0G2JPF8 293 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 HNRNPCL3B7ZW38 293 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CLDN4O14493 209 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 NTSR2O95665 410 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 HNRNPCL4P0DMR1 293 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PRDX6P30041 224 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 HOXC8P31273 242 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 USF2Q15853 346 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PLCZ1Q86YW0 608 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 FIBCD1Q8N539 461 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 AVL9Q8NBF6 648 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 DNAJB8Q8NHS0 232 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 RAD51AP1Q96B01 352 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PRICKLE1Q96MT3 831 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PHPT1Q9NRX4 125 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 MYPNQ86TC9 1320 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 NOS1APO75052 506 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 APODP05090 189 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 MASP1P48740 699 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 TAPT1Q6NXT6 567 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 TBC1D21Q8IYX1 336 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CLIP3Q96DZ5 547 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 FERD3LQ96RJ6 166 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CDH7Q9ULB5 785 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 APC2O95996 2303 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PRR36Q9H6K5 1346 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SCN2BO60939 215 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ATXN1P54253 815 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 DGCR6Q14129 220 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SPATA20Q8TB22 786 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 HOPXQ9BPY8 73 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF670Q9BS34 389 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SLIT3O75094 1523 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 FAM205AQ6ZU69 1335 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ALPPL2P10696 532 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 MTHFD1P11586 935 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF37AP17032 561 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ABATP80404 500 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PRKG2Q13237 762 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 EIF2S3LQ2VIR3 472 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 WDR59Q6PJI9 974 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PTCHD4Q6ZW05 846 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 UBR7Q8N806 425 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 MARCH10Q8NA82 808 aaPredicted RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 DPF2Q92785 391 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 NEDD4LQ96PU5 975 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 EHD1Q9H4M9 534 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ANKHQ9HCJ1 492 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ETNK2Q9NVF9 386 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 DNAJC11Q9NVH1 559 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SAMHD1Q9Y3Z3 626 aaKnown RBP8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SNX3O60493 162 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PITPNAQ00169 270 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 RAPSNQ13702 412 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PSMD5Q16401 504 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PIK3R6Q5UE93 754 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 CYP2R1Q6VVX0 501 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 FCGR1BQ92637 280 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 PANX1Q96RD7 426 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 KIAA1683Q9H0B3 1180 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SHPRHQ149N8 1683 aa8.88□□□□□ -0.99
SHROOM4-203ENST00000460112 SALL1Q9NSC2 1324 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 SHOX2O60902 331 aaPredicted RBP8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 RLN1P04808 185 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 THRBP10828 461 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 ATF6P18850 670 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 ALDH4A1P30038 563 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 CTNNB1P35222 781 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 STXBP1P61764 594 aaKnown RBP8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 FKBP1AP62942 108 aaKnown RBP8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 C15orf59Q2T9L4 293 aaPredicted RBP8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 FKBP1CQ5VVH2 108 aa8.87□□□□□ -0.99
SHROOM4-203ENST00000460112 LIPMQ5VYY2 423 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms