RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SCML2Q9UQR0 700 aa15.78■□□□□ 0.12
CMTM3-203ENST00000460097 USP3Q9Y6I4 520 aa15.78■□□□□ 0.12
CMTM3-203ENST00000460097 GREB1Q4ZG55 1949 aa15.78■□□□□ 0.12
CMTM3-203ENST00000460097 DENND4AQ7Z401 1863 aa15.78■□□□□ 0.12
CMTM3-203ENST00000460097 ZNF840PA6NDX5 716 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 PAPSS1O43252 624 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-203ENST00000460097 GRID2O43424 1007 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 VAPBO95292 243 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 BMP2P12643 396 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 DDX6P26196 483 aaKnown RBP eCLIP15.77■□□□□ 0.12
CMTM3-203ENST00000460097 EPHA3P29320 983 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 GRIA1P42261 906 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 TKTL1P51854 596 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 MTA1Q13330 715 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 C15orf59Q2T9L4 293 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-203ENST00000460097 PPM1JQ5JR12 505 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 OLFML1Q6UWY5 402 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 HACD2Q6Y1H2 254 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 ZNF354CQ86Y25 554 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 PSTKQ8IV42 348 aaKnown RBP15.77■□□□□ 0.12
CMTM3-203ENST00000460097 GJD3Q8N144 294 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 GALNT4Q8N4A0 578 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 HSPBAP1Q96EW2 488 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 ZSWIM3Q96MP5 696 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 COQ10BQ9H8M1 238 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 LIMD1Q9UGP4 676 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 ZMYM5Q9UJ78 669 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 PSAT1Q9Y617 370 aa15.77■□□□□ 0.12
CMTM3-203ENST00000460097 TCAF2A6NFQ2 919 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 SOBPA7XYQ1 873 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 PIK3R2O00459 728 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 COL6A2P12110 1019 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 DPP6P42658 865 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 POLD2P49005 469 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 RGS7P49802 495 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 PFKPQ01813 784 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 NHSL2Q5HYW2 709 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 TXNDC8Q6A555 127 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 OR6B2Q6IFH4 312 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 KRT80Q6KB66 452 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 MON1AQ86VX9 555 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 NECAB3Q96P71 396 aaPredicted RBP15.77■□□□□ 0.11
CMTM3-203ENST00000460097 SLC46A2Q9BY10 475 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 LRRC40Q9H9A6 602 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 NSMCE4AQ9NXX6 385 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 TMEM9Q9P0T7 183 aa15.77■□□□□ 0.11
CMTM3-203ENST00000460097 A0A096LPK6 155 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TRIM24O15164 1050 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 USP17L7P0C7H9 530 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TFEBP19484 476 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 MGAT1P26572 445 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 SLC6A3Q01959 620 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 GBE1Q04446 702 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 STX5Q13190 355 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 PTK2BQ14289 1009 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 INTS11Q5TA45 600 aaKnown RBP15.76■□□□□ 0.11
CMTM3-203ENST00000460097 IL23RQ5VWK5 629 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 CASC4Q6P4E1 433 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TMEM110Q86TL2 294 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TMEM135Q86UB9 458 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 SIX6OS1Q8N1H7 587 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 ZSCAN18Q8TBC5 510 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TFAP2CQ92754 450 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 ISOC1Q96CN7 298 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 YTHDF1Q9BYJ9 559 aaKnown RBP15.76■□□□□ 0.11
CMTM3-203ENST00000460097 TLR8Q9NR97 1041 aaKnown RBP15.76■□□□□ 0.11
CMTM3-203ENST00000460097 ARMC1Q9NVT9 282 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 GMIPQ9P107 970 aa15.76■□□□□ 0.11
CMTM3-203ENST00000460097 MAGEB16A2A368 324 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 TRPC5OSA6NMA1 111 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 HTRA2O43464 458 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ZDHHC11BP0C7U3 371 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 LCP1P13796 627 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ACADSBP45954 432 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 NDST2P52849 883 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 KCNC4Q03721 635 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ADIGQ0VDE8 80 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ZNF638Q14966 1978 aaKnown RBP15.75■□□□□ 0.11
CMTM3-203ENST00000460097 CA9Q16790 459 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 FAM78AQ5JUQ0 283 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 PM20D1Q6GTS8 502 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 PAOXQ6QHF9 649 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 CHSY3Q70JA7 882 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 MTSS1LQ765P7 747 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 DOCK8Q8NF50 2099 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 DQX1Q8TE96 717 aaKnown RBP15.75■□□□□ 0.11
CMTM3-203ENST00000460097 SMARCD2Q92925 531 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 NXPE3Q969Y0 559 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 PBXIP1Q96AQ6 731 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ASB16Q96NS5 453 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 TMEM79Q9BSE2 394 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ULBP1Q9BZM6 244 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 TRPC7Q9HCX4 862 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 DTLQ9NZJ0 730 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 B3GNT3Q9Y2A9 372 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-203ENST00000460097 ANHXE9PGG2 379 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 NPHS1O60500 1241 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 GABBR2O75899 941 aa15.75■□□□□ 0.11
CMTM3-203ENST00000460097 INHBBP09529 407 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms