RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 UGT3A1Q6NUS8 523 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PLEKHG7Q6ZR37 379 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM47EQ6ZV65 393 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 FKBP9P1Q75LS8 142 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CLNKQ7Z7G1 428 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 DCP1BQ8IZD4 617 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TBC1D19Q8N5T2 526 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 LRRC52Q8N7C0 313 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TMIEQ8NEW7 156 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TSPAN14Q8NG11 270 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 U2AF1L4Q8WU68 220 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PDCD6IPQ8WUM4 868 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ATP6V1E2Q96A05 226 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ISOC1Q96CN7 298 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 MSANTD3Q96H12 275 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 UNC93B1Q9H1C4 597 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CAB39LQ9H9S4 337 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CYP3A43Q9HB55 503 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 ACP6Q9NPH0 428 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TRMT13Q9NUP7 481 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 DNAJC17Q9NVM6 304 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 DPP3Q9NY33 737 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TAS2R14Q9NYV8 317 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 TJP2Q9UDY2 1190 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 OGDHLQ9ULD0 1010 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 UBQLN1Q9UMX0 589 aaKnown RBP6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PCDHGC3Q9UN70 934 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 HES2Q9Y543 173 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
CUBNP3-201ENST00000457461 CLUHO75153 1309 aa6.84□□□□□ -1.32
CUBNP3-201ENST00000457461 TTC3P53804 2025 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 SCN5AQ14524 2016 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 KIAA0100Q14667 2235 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 SMIM28A0A1B0GU29 152 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TMEM82A0PJX8 343 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 LINC00862A6NCI5 91 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PSMD12O00232 456 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PIRO00625 290 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PCDH17O14917 1159 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PPM1DO15297 605 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 INPPL1O15357 1258 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 RAD51CO43502 376 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 BCAS1O75363 584 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 IL1BP01584 269 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 UGT2B4P06133 528 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 CTSHP09668 335 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 LTA4HP09960 611 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ENO3P13929 434 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TAC1P20366 129 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 THPOP40225 353 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 NDST1P52848 882 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TMBIM6P55061 237 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 YWHAEP62258 255 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 RNF4P78317 190 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 RBP5P82980 135 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 MYBPC1Q00872 1141 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 UBE3AQ05086 875 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 CD300CQ08708 224 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 NR1H3Q13133 447 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TOP3AQ13472 1001 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 COTL1Q14019 142 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PFKFB4Q16877 469 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 CLEC16AQ2KHT3 1053 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 SETMARQ53H47 684 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF667Q5HYK9 610 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF618Q5T7W0 954 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 RFWD3Q6PCD5 774 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TMEM270Q6UE05 265 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TRIM72Q6ZMU5 477 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 KRT74Q7RTS7 529 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ADGRG2Q8IZP9 1017 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TMEM130Q8N3G9 435 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PLD5Q8N7P1 536 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 LRRC57Q8N9N7 239 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF540Q8NDQ6 660 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 OR5H6Q8NGV6 325 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 WDR48Q8TAF3 677 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TCP10LQ8TDR4 215 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 UTP15Q8TED0 518 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 C10orf82Q8WW14 230 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 RFFLQ8WZ73 363 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 PTP4A1Q93096 173 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TRMT2BQ96GJ1 504 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 DEPDC7Q96QD5 511 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 TGS1Q96RS0 853 aaKnown RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF556Q9HAH1 456 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 SCUBE2Q9NQ36 999 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 HPS4Q9NQG7 708 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 NPDC1Q9NQX5 325 aaPredicted RBP6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 CISHQ9NSE2 258 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 ACTR3BQ9P1U1 418 aa6.83□□□□□ -1.32
CUBNP3-201ENST00000457461 CYB5R1Q9UHQ9 305 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms