RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DMTF1Q9Y222 760 aa3.8□□□□□ -1.8
RBM39-220ENST00000455343 ITIH6Q6UXX5 1313 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 UBA6A0AVT1 1052 aaPredicted RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 TARSL2A2RTX5 802 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 EME2A4GXA9 379 aaPredicted RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 PLD2O14939 933 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 SCAMP1O15126 338 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PLRG1O43660 514 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 SDC3O75056 442 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 TCEA3O75764 348 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 RNASEH2AO75792 299 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 PIAS2O75928 621 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 LATS1O95835 1130 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 HMBSP08397 361 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ITGA2BP08514 1039 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 FAM200BP0CF97 657 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 DLATP10515 647 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 C5AR1P21730 350 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CD70P32970 193 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 SGSHP51688 502 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 NDST1P52848 882 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PDX1P52945 283 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 INCA1Q0VD86 236 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 SRSF6Q13247 344 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 TRPC3Q13507 836 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 MORC3Q14149 939 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 STAT4Q14765 748 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ZNF667Q5HYK9 610 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 C3orf38Q5JPI3 329 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 RAB41Q5JT25 222 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PIK3R6Q5UE93 754 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PM20D1Q6GTS8 502 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ZCCHC8Q6NZY4 707 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 EPM2AIP1Q7L775 607 aaPredicted RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 BHLHA9Q7RTU4 235 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PRPF39Q86UA1 669 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 TRIM69Q86WT6 500 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 MMAAQ8IVH4 418 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 C12orf56Q8IXR9 622 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ARL14Q8N4G2 192 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ANKRD53Q8N9V6 530 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 OR14C36Q8NHC7 312 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 FIBINQ8TAL6 211 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 PARD3BQ8TEW8 1205 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 HTR3CQ8WXA8 447 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 HPS3Q969F9 1004 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CCDC127Q96BQ5 260 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 MIEF2Q96C03 454 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CYFIP2Q96F07 1278 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 EPSTI1Q96J88 318 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 RPL10LQ96L21 214 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 TWNKQ96RR1 684 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 DUSP16Q9BY84 665 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ABCG4Q9H172 646 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CAAP1Q9H8G2 361 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 ACSS2Q9NR19 701 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 AGPAT3Q9NRZ7 376 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 FAM49BQ9NUQ9 324 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 NLGN3Q9NZ94 848 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 KCMF1Q9P0J7 381 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 HMGXB4Q9UGU5 601 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CYTH4Q9UIA0 394 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 RASAL2Q9UJF2 1139 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 REXO2Q9Y3B8 237 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 PCDHGA7Q9Y5G6 932 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 DOPEY2Q9Y3R5 2298 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 NUMA1Q14980 2115 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
RBM39-220ENST00000455343 ITPR2Q14571 2701 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 MYOFQ9NZM1 2061 aa3.79□□□□□ -1.8
RBM39-220ENST00000455343 CEP192Q8TEP8 1941 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CREBBPQ92793 2442 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3DA0A087WVF3 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3IA0A087WXS9 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3EA0A087X179 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3KA0A087X1G2 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3FA6NER0 549 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 NEMP2A6NFY4 417 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TTC34A8MYJ7 566 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3LB9A6J9 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 PRAMEF26H0Y7S4 382 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 NTN3O00634 580 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 TPP1O14773 563 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CASC3O15234 703 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 EIF3DO15371 548 aaKnown RBP eCLIP3.78□□□□□ -1.8
RBM39-220ENST00000455343 IRAK2O43187 625 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 SLC7A4O43246 635 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 STX6O43752 255 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 RNASEH1O60930 286 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 PPFIA2O75334 1257 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 KRT38O76015 456 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TNFSF15O95150 251 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 VNN1O95497 513 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 BMP15O95972 392 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ASS1P00966 412 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 IGLV3-27P01718 113 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ASLP04424 464 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms