RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SCML1Q9UN30 329 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 SOX13Q9UN79 622 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 C16orf96A6NNT2 1141 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 MAP3K13O43283 966 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 MMP2P08253 660 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 HADHAP40939 763 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 CD86P42081 329 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 AP1S1P61966 158 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 QPCTQ16769 361 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ANKRD20A4Q4UJ75 823 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 LRRC73Q5JTD7 316 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TRMT10BQ6PF06 316 aaKnown RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 LVRNQ6Q4G3 990 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 C6orf89Q6UWU4 347 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PARS2Q7L3T8 475 aaKnown RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PAF1Q8N7H5 531 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 GABPB2Q8TAK5 448 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TCP10LQ8TDR4 215 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PDCD6IPQ8WUM4 868 aaKnown RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 GAB3Q8WWW8 586 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ATOH1Q92858 354 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 OSBPL1AQ9BXW6 950 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PITPNM3Q9BZ71 974 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SMYD2Q9NRG4 433 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PCDHGA2Q9Y5H1 932 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SDK1Q7Z5N4 2213 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 CEP192Q8TEP8 1941 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SNX3O60493 162 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PYGBP11216 843 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TAC1P20366 129 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ITGB7P26010 798 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SERPINA4P29622 427 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 CD6P30203 668 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 GP5P40197 560 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 CCNFP41002 786 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 NEK3P51956 506 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TRAF2Q12933 501 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ALG1LQ6GMV1 187 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 FBXL19Q6PCT2 694 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 USP30Q70CQ3 517 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ERN2Q76MJ5 926 aaKnown RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TTC7BQ86TV6 843 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ZSWIM9Q86XI8 627 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 OTUD6BQ8N6M0 293 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 OR14C36Q8NHC7 312 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SPATA22Q8NHS9 363 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SERAC1Q96JX3 654 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 SPACA7Q96KW9 195 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ZNF641Q96N77 438 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 TUBGCP5Q96RT8 1024 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ELAC2Q9BQ52 826 aaKnown RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 GPR174Q9BXC1 333 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 FSD1LQ9BXM9 530 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 ARNT2Q9HBZ2 717 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 MLXIPLQ9NP71 852 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 WSB2Q9NYS7 404 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-202ENST00000425436 UBP1Q9NZI7 540 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 HCN4Q9Y3Q4 1203 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 THADAQ6YHU6 1953 aa15.63■□□□□ 0.09
SHOX2-202ENST00000425436 FANCMQ8IYD8 2048 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 FRYLO94915 3013 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PRR23AA6NEV1 266 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 TRAFD1O14545 582 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 LILRB5O75023 590 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PIAS1O75925 651 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 MT-CYBP00156 380 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 IGLV3-19P01714 112 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PRKCGP05129 697 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 TIMP2P16035 220 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PAMP19021 973 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 OXTRP30559 389 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 CRHR1P34998 444 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 ADRA1AP35348 466 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 MAPK8P45983 427 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PTPN5P54829 565 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 CRADDP78560 199 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 SEMG2Q02383 582 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 SFSWAPQ12872 951 aaKnown RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 ILF2Q12905 390 aaKnown RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 LAMB3Q13751 1172 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 GRM3Q14832 879 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 SLC1A5Q15758 541 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 DBN1Q16643 649 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PIP5KL1Q5T9C9 394 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 AGBL4Q5VU57 503 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PDPK2PQ6A1A2 396 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PACS1Q6VY07 963 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 CEP68Q76N32 757 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 KDELC2Q7Z4H8 507 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 TMEFF1Q8IYR6 380 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 PPHLN1Q8NEY8 458 aaKnown RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 ZNF669Q96BR6 464 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 IMP4Q96G21 291 aaKnown RBP15.62■□□□□ 0.09
SHOX2-202ENST00000425436 HDAC8Q9BY41 377 aa15.62■□□□□ 0.09
SHOX2-202ENST00000425436 BTBD1Q9H0C5 482 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms