RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SLC11A2P49281 568 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 POU4F1Q01851 419 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 MRPL58Q14197 206 aaKnown RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 FASTKQ14296 549 aaKnown RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CYTH1Q15438 398 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 LYSMD3Q7Z3D4 306 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 EID2BQ96D98 161 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 RNF112Q9ULX5 631 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 LRRC42Q9Y546 428 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CPQQ9Y646 472 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 FFAR3O14843 346 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 GPR42O15529 346 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 MAGEC1O60732 1142 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 RAP1GDS1P52306 607 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 IL10RBQ08334 325 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CDH18Q13634 790 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 CYHR1Q6ZMK1 362 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 PIWIL4Q7Z3Z4 852 aaKnown RBP11.9□□□□□ -0.5
PTPRN-204ENST00000423636 LMNTD1Q8N9Z9 388 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 SORCS1Q8WY21 1168 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 APBB2Q92870 758 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 MIEF2Q96C03 454 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 SLAMF8Q9P0V8 285 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 SQORQ9Y6N5 450 aa11.9□□□□□ -0.5
PTPRN-204ENST00000423636 RGSL1A5PLK6 1076 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 WFS1O76024 890 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 BAIAP3O94812 1187 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ALDOCP09972 364 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 LEPRP48357 1165 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 RHOAP61586 193 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 FOXD4Q12950 439 aaPredicted RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 USP41Q3LFD5 358 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ANKS3Q6ZW76 656 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TSPAN33Q86UF1 283 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CACUL1Q86Y37 369 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CDYL2Q8N8U2 506 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TEX37Q96LM6 180 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 KLHL32Q96NJ5 620 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF184Q99676 751 aaPredicted RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TDRD1Q9BXT4 1180 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 AKTIPQ9H8T0 292 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 EIF2B4Q9UI10 523 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 TCAF2A6NFQ2 919 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 OR6C75A6NL08 312 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 E5RI56 91 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 STX7O15400 261 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 PSMD3O43242 534 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 PGM3O95394 542 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 MYL4P12829 197 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 GABRR2P28476 465 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 RBBP7Q16576 425 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ICA1LQ8NDH6 482 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 OR52B6Q8NGF0 335 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 PIP4K2CQ8TBX8 421 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ISL2Q96A47 359 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 GSTO2Q9H4Y5 243 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 YIPF1Q9Y548 306 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 DNAJC15Q9Y5T4 150 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 PATJQ8NI35 1801 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 ANTXRLA6NF34 631 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 MROH6A6NGR9 719 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 IL1BP01584 269 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CD1DP15813 335 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 IGSF21Q96ID5 467 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 CFAP54Q96N23 3096 aa11.89□□□□□ -0.51
PTPRN-204ENST00000423636 LOC285095A0A1B0GVY8 99 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ARHGEF37A1IGU5 675 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 FBP2O00757 339 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CDK14O94921 469 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CLDN7O95471 211 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 NCK1P16333 377 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 KLC1Q07866 573 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 BFSP2Q13515 415 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 PTK2BQ14289 1009 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 IYDQ6PHW0 289 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 BNC2Q6ZN30 1099 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms