RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GPSM3Q9Y4H4 160 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 MYLKQ15746 1914 aa16.41■□□□□ 0.22
LINC00404-201ENST00000418660 C1orf232A0A0U1RR37 186 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 RGSL1A5PLK6 1076 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 BTNL10A8MVZ5 291 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 MTSS1O43312 755 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 USP12O75317 370 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 IVLP07476 585 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 PTPN3P26045 913 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 POLD2P49005 469 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 CDK18Q07002 472 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 ADCY2Q08462 1091 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 GALNT3Q14435 633 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
LINC00404-201ENST00000418660 CCL4L1Q8NHW4 92 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 CCHCR1Q8TD31 782 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 KRT35Q92764 455 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 CCDC74AQ96AQ1 378 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 SCARF2Q96GP6 870 aaPredicted RBP16.4■□□□□ 0.22
LINC00404-201ENST00000418660 HIC2Q96JB3 615 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 AGAP2Q99490 1192 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 RIOK2Q9BVS4 552 aaKnown RBP16.4■□□□□ 0.22
LINC00404-201ENST00000418660 GSDMCQ9BYG8 508 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 DPEP2Q9H4A9 486 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 PKD2L2Q9NZM6 624 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
LINC00404-201ENST00000418660 PCDHA3Q9Y5H8 950 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
LINC00404-201ENST00000418660 NOBOXO60393 691 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 BRINP1O60477 761 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 GLB1P16278 677 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 CTNNA1P35221 906 aaKnown RBP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 GNPDA1P46926 289 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 SPINT3P49223 89 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 COPS2P61201 443 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 WASHC5Q12768 1159 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 PCSK7Q16549 785 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 C14orf28Q4W4Y0 310 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 KDELC2Q7Z4H8 507 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 NRROSQ86YC3 692 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 KIAA1524Q8TCG1 905 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 COX14Q96I36 57 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 WDR24Q96S15 920 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 BAG1Q99933 345 aaPredicted RBP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 FAM83DQ9H4H8 585 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 SUDS3Q9H7L9 328 aaPredicted RBP16.39■□□□□ 0.21
LINC00404-201ENST00000418660 MAGEE1Q9HCI5 957 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 RABGEF1Q9UJ41 708 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 WDFY3Q8IZQ1 3526 aa16.39■□□□□ 0.21
LINC00404-201ENST00000418660 KNTC1P50748 2209 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 A0A087WV48 116 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 HACD1B0YJ81 288 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 B4DGG1 531 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 NTN3O00634 580 aaPredicted RBP16.38■□□□□ 0.21
LINC00404-201ENST00000418660 PJA2O43164 708 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 MT-CYBP00156 380 aaPredicted RBP16.38■□□□□ 0.21
LINC00404-201ENST00000418660 PNLIPP16233 465 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 ACTN2P35609 894 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 ADCY8P40145 1251 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 LSSP48449 732 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 VAV2P52735 878 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 SPIDRQ14159 915 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 CERCAMQ5T4B2 595 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 HENMT1Q5T8I9 393 aaKnown RBP16.38■□□□□ 0.21
LINC00404-201ENST00000418660 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 BBS12Q6ZW61 710 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 LYSMD3Q7Z3D4 306 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 ZC3H18Q86VM9 953 aaKnown RBP16.38■□□□□ 0.21
LINC00404-201ENST00000418660 LSMEM2Q8N112 164 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 SPATA22Q8NHS9 363 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 VAT1Q99536 393 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 POLR1BQ9H9Y6 1135 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 ZFYVE1Q9HBF4 777 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
LINC00404-201ENST00000418660 IMPACTQ9P2X3 320 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 APPL1Q9UKG1 709 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 TMEM98Q9Y2Y6 226 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
LINC00404-201ENST00000418660 CASC3O15234 703 aaKnown RBP16.37■□□□□ 0.21
LINC00404-201ENST00000418660 INPP4BO15327 924 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
LINC00404-201ENST00000418660 NDST3O95803 873 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 MPOP05164 745 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 FGF1P05230 155 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 CTNNA2P26232 953 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 CDC25BP30305 580 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 CD68P34810 354 aaPredicted RBP16.37■□□□□ 0.21
LINC00404-201ENST00000418660 GABREP78334 506 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 CTBSQ01459 385 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 XRCC4Q13426 336 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 PEX6Q13608 980 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 HLTFQ14527 1009 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00404-201ENST00000418660 TBC1D25Q3MII6 688 aa16.37■□□□□ 0.21
LINC00404-201ENST00000418660 C19orf48Q6RUI8 117 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms