RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 BEND7Q8N7W2 519 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 CENPNQ96H22 339 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 PXMP2Q9NR77 195 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 CYP4B1P13584 511 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 PSMB4P28070 264 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 COL26A1Q96A83 441 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 NDOR1Q9UHB4 597 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 NUAK1O60285 661 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 AP2A2O94973 939 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 HOXC8P31273 242 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 MANFP55145 182 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 ITGA7Q13683 1181 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 METTL7BQ6UX53 244 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RC3H2Q9HBD1 1191 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RPLP0P05388 317 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 SLC7A2P52569 658 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 TMEM17Q86X19 198 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RNF31Q96EP0 1072 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 CDH22Q9UJ99 828 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 ALDH2P05091 517 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 OCLNQ16625 522 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 DSELQ8IZU8 1212 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 PPCDCQ96CD2 204 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 NODALQ96S42 347 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 DNTTP04053 509 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 FABP3P05413 133 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 TFEBP19484 476 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RPL26P61254 145 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 MPP2Q14168 576 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RHEBQ15382 184 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 CPSF7Q8N684 471 aaKnown RBP12.13□□□□□ -0.47
SHANK2-203ENST00000409161 ARL10Q8N8L6 244 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 RCN3Q96D15 328 aa12.13□□□□□ -0.47
SHANK2-203ENST00000409161 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 RAB11FIP2Q7L804 512 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 MTFMTQ96DP5 389 aaKnown RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 OR12D3Q9UGF7 316 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 PCDHGB7Q9Y5F8 929 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 PIGBOS1A0A0B4J2F0 54 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CD2P06729 351 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 SLC27A1Q6PCB7 646 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 DNAJB8Q8NHS0 232 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 IPCEF1Q8WWN9 437 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 UFD1Q92890 307 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TUBGCP5Q96RT8 1024 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 FBXO10Q9UK96 956 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TARBP1Q13395 1621 aaKnown RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CD86P42081 329 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 OAZ1P54368 228 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CPNE2Q96FN4 548 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF347Q96SE7 839 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 KLHL35Q6PF15 583 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 FOXR2Q6PJQ5 311 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 SNX20Q7Z614 316 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 RANBP3LQ86VV4 465 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CELF6Q96J87 481 aaKnown RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 RHOJQ9H4E5 214 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF208O43345 1280 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 SNAPC1Q16533 368 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 LIN52Q52LA3 116 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 HDDC3Q8N4P3 179 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 MARCH2Q9P0N8 246 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TRAF6Q9Y4K3 522 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 PCDHGB1Q9Y5G3 927 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 ABHD14A-ACY1A0A1B0GW23 586 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 GSC2O15499 205 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TPH1P17752 444 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 CCNYL2Q5T2Q4 361 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 NXNL1Q96CM4 212 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 DNMT3LQ9UJW3 386 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 GAKO14976 1311 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 OR2AT4A6NND4 320 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 GALK1P51570 392 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
SHANK2-203ENST00000409161 ORC1Q13415 861 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 TMEM119Q4V9L6 283 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 FUCA2Q9BTY2 467 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 ALG5Q9Y673 324 aa12.12□□□□□ -0.47
SHANK2-203ENST00000409161 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
SHANK2-203ENST00000409161 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
SHANK2-203ENST00000409161 YES1P07947 543 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms