RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LAMP2P13473 410 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 RARGP13631 454 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ATF6P18850 670 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 EIF1AXP47813 144 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 MAXP61244 160 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 BNIP3Q12983 259 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 RBM39Q14498 530 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 SLC9A4Q6AI14 798 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TATDN2Q93075 761 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 APOPT1Q96IL0 206 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 PLEKHA6Q9Y2H5 1048 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 SLC27A5Q9Y2P5 690 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 E7EQ34 232 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 NPTX2P47972 431 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 SEC13P55735 322 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 LAMTOR4Q0VGL1 99 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TMED8Q6PL24 325 aaPredicted RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 USP49Q70CQ1 688 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 SUN3Q8TAQ9 357 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 EXOSC8Q96B26 276 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMU1-201ENST00000397149 PCDHGA6Q9Y5G7 932 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 AP5Z1O43299 807 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 FTH1P02794 183 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 HGFP14210 728 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 PSMB4P28070 264 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 SDC2P34741 201 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 RASGEF1BQ0VAM2 473 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ELAVL2Q12926 359 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 DSG2Q14126 1118 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 PIK3C3Q8NEB9 887 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 CD300LFQ8TDQ1 290 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ZNF75CPQ92670 426 aaPredicted RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 MGME1Q9BQP7 344 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 CORO2BQ9UQ03 480 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 LINGO3P0C6S8 592 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 NAMPTP43490 491 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 CCL23P55773 120 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 CREB5Q02930 508 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 MTFR2Q6P444 385 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 GET4Q7L5D6 327 aaPredicted RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 GPR180Q86V85 440 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TREML1Q86YW5 311 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 C11orf16Q9NQ32 467 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TRNAU1APQ9NX07 287 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 KCNIP3Q9Y2W7 256 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 MEN1O00255 615 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 LRIG2O94898 1065 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 NUDT17P0C025 328 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 THEGLP0DJG4 465 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 MAGEA11P43364 429 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 ALG10BQ5I7T1 473 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 SLC25A36Q96CQ1 311 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 CNDP2Q96KP4 475 aaKnown RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 ZNF184Q99676 751 aaPredicted RBP12.32□□□□□ -0.44
SMU1-201ENST00000397149 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
SMU1-201ENST00000397149 TEX14Q8IWB6 1497 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 RIIAD1A6NNX1 92 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 NR0B1P51843 470 aaKnown RBP12.31□□□□□ -0.44
SMU1-201ENST00000397149 NAGLUP54802 743 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CDH4P55283 916 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 PDK3Q15120 406 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 IDNKQ5T6J7 187 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 KCNT2Q6UVM3 1135 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 NPNTQ6UXI9 565 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 OR5T1Q8NG75 326 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 OR10H4Q8NGA5 316 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
SMU1-201ENST00000397149 SLC24A2Q9UI40 661 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 METTL21EPA6NDL7 271 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 LTA4HP09960 611 aaKnown RBP12.31□□□□□ -0.44
SMU1-201ENST00000397149 ZNF20P17024 532 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ATP5C1P36542 298 aaKnown RBP12.31□□□□□ -0.44
SMU1-201ENST00000397149 ECH1Q13011 328 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 MTX3Q5HYI7 312 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ADNP2Q6IQ32 1131 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CEP97Q8IW35 865 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 CD302Q8IX05 232 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ATP13A3Q9H7F0 1226 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 ASAH2Q9NR71 780 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 C2CD2Q9Y426 696 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 FGBP02675 491 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 POU2F1P14859 743 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 SDHAF4Q5VUM1 108 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 SIRPGQ9P1W8 387 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 GNG13Q9P2W3 67 aa12.31□□□□□ -0.44
SMU1-201ENST00000397149 LEF1Q9UJU2 399 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms