RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 GRID1Q9ULK0 1009 aa12.88□□□□□ -0.35
PSMA1-201ENST00000396394 PHTF1Q9UMS5 762 aa12.88□□□□□ -0.35
PSMA1-201ENST00000396394 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
PSMA1-201ENST00000396394 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 K7ERQ8 282 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 ATP5HO75947 161 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 KRT38O76015 456 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 TGDSO95455 350 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 CER1O95813 267 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 PRNPP04156 253 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 GLDCP23378 1020 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 HTR7P34969 479 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 CCNFP41002 786 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 CSNK1EP49674 416 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 ARF5P84085 180 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 WASHC5Q12768 1159 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 SEPT7Q16181 437 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 LINGO4Q6UY18 593 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 UNC5AQ6ZN44 842 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 PIP4P1Q86T03 277 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 PLPP6Q8IY26 295 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 TAB3Q8N5C8 712 aaPredicted RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 ISG20Q96AZ6 181 aaKnown RBP12.87□□□□□ -0.35
PSMA1-201ENST00000396394 APOPT1Q96IL0 206 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 ORAI3Q9BRQ5 295 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3DA0A087WVF3 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3IA0A087WXS9 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3KA0A087X1G2 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3FA6NER0 549 aaPredicted RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 ERI2A8K979 691 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 WASH4PA8MWX3 477 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3LB9A6J9 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 EEF2KO00418 725 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 SMAD6O43541 496 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 BNIP3LO60238 219 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 RAMP2O60895 175 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 CD59P13987 128 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 MX2P20592 715 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 KCNA4P22459 653 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 EPHB2P29323 1055 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 HNRNPH1P31943 449 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 NUDT1P36639 197 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 POLD3Q15054 466 aaPredicted RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3GQ6DHY5 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 SERAC1Q96JX3 654 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 VAT1Q99536 393 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 LGMNQ99538 433 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 EPAS1Q99814 870 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 PAIP2Q9BPZ3 127 aaKnown RBP12.86□□□□□ -0.35
PSMA1-201ENST00000396394 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 SLC40A1Q9NP59 571 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 ABCF3Q9NUQ8 709 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 TRHDEQ9UKU6 1024 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
PSMA1-201ENST00000396394 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 VILLO15195 856 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 LATO43561 262 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 KDELR3O43731 214 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 MFSD11O43934 449 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 CD160O95971 181 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 CTSLP07711 333 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 ERCC2P18074 760 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 ACVRL1P37023 503 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 METAP1P53582 386 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
PSMA1-201ENST00000396394 BNC1Q01954 994 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 PPIDQ08752 370 aaKnown RBP12.85□□□□□ -0.35
PSMA1-201ENST00000396394 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 DBN1Q16643 649 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 HLA-BQ31612 363 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 CARD16Q5EG05 197 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 AGBL4Q5VU57 503 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 KLHDC8BQ8IXV7 354 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 FITM2Q8N6M3 262 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 RTL3Q8N8U3 475 aaKnown RBP12.85□□□□□ -0.35
PSMA1-201ENST00000396394 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 OR2I1PQ8NGU4 316 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
PSMA1-201ENST00000396394 ACMSDQ8TDX5 336 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms