RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SNX16P57768 344 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 IFIT5Q13325 482 aaKnown RBP1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 ITGADQ13349 1161 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 RUNX2Q13950 521 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 SLC18A3Q16572 532 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 KRT24Q2M2I5 525 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 CTU2Q2VPK5 515 aaKnown RBP1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 ODR4Q5SWX8 454 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MFSD6Q6ZSS7 791 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 GPRIN3Q6ZVF9 776 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 PRSS45Q7RTY3 260 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 TBC1D26Q86UD7 250 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 NOXA1Q86UR1 476 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 SLC44A2Q8IWA5 706 aaPredicted RBP1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 ADSSL1Q8N142 457 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MYO1HQ8N1T3 1032 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 FSIP1Q8NA03 581 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 SCCPDHQ8NBX0 429 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MRGPRDQ8TDS7 321 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 KIAA1191Q96A73 305 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 C3orf49Q96BT1 292 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MPHOSPH8Q99549 860 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 CLSTN3Q9BQT9 956 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 NEURL2Q9BR09 285 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 NPLQ9BXD5 320 aaPredicted RBP1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 RAB11FIP5Q9BXF6 653 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 LAT2Q9GZY6 243 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MMP25Q9NPA2 562 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 CHST11Q9NPF2 352 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZNF71Q9NQZ8 489 aaPredicted RBP1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 SMYD2Q9NRG4 433 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 NTNG1Q9Y2I2 539 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 MOB4Q9Y3A3 225 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 LOXL2Q9Y4K0 774 aa1.19□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZCWPW2A0A1B0GU75 182 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 GOLGA6CA6NDK9 693 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 GOLGA6BA6NDN3 693 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 ACTL6BO94805 426 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 NR3C1P04150 777 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 GOLGA6DP0CG33 693 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 UBA1P22314 1058 aaKnown RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 RRM1P23921 792 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 HNF1BP35680 557 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 AMPHP49418 695 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 PGFP49763 221 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 CLDN2P57739 230 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 RAPSNQ13702 412 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 TMEM35AQ53FP2 167 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 IZUMO3Q5VZ72 239 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 LRRC8EQ6NSJ5 796 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 KCTD18Q6PI47 426 aaPredicted RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 IL20RBQ6UXL0 311 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 MOB3CQ70IA8 216 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 RRAGAQ7L523 313 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 C14orf80Q86SX3 495 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 DPP9Q86TI2 863 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 OR5R1Q8NH85 324 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 TTC8Q8TAM2 541 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 TTC17Q96AE7 1141 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 RNFT2Q96EX2 444 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZC3HAV1LQ96H79 300 aaKnown RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 TRAPPC9Q96Q05 1148 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 SOSTQ9BQB4 213 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 PSD2Q9BQI7 771 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 GPATCH1Q9BRR8 931 aaKnown RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 NAA15Q9BXJ9 866 aaKnown RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 PABPC3Q9H361 631 aaKnown RBP1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 SIX2Q9NPC8 291 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 TMLHEQ9NVH6 421 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 GOLGA6AQ9NYA3 693 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 NDUFAF4Q9P032 175 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 FAM50BQ9Y247 325 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 JRKLQ9Y4A0 524 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 EID1Q9Y6B2 187 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 STON1Q9Y6Q2 735 aa1.18□□□□□ -2.22
RNU6-239P-201ENST00000390990 C1orf226A1L170 272 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 C5orf60A6NFR6 353 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 MAGEB17A8MXT2 336 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 TSPAN6O43657 245 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 PLA2G4BP0C869 781 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 FAM157CP0CG43 387 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 IGHV4-38-2P0DP08 117 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 POLR2CP19387 275 aaPredicted RBP1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 MSH3P20585 1137 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 SNRPD1P62314 119 aaKnown RBP1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 AP2B1P63010 937 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 SPARCL1Q14515 664 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 DCST1Q5T197 706 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 TTI2Q6NXR4 508 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 SYT13Q7L8C5 426 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 PIWIL4Q7Z3Z4 852 aaKnown RBP1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZNF611Q8N823 705 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 HMGCLL1Q8TB92 370 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 FAM71BQ8TC56 605 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 RFT1Q96AA3 541 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 MASTLQ96GX5 879 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 ZNF570Q96NI8 536 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 MXRA8Q9BRK3 442 aa1.17□□□□□ -2.22
RNU6-239P-201ENST00000390990 SLC25A18Q9H1K4 315 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms