RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	MILR1	Q7Z6M3	343 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	AHI1	Q8N157	1196 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	DCAF4L2	Q8NA75	395 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	CDKN2AIPNL	Q96HQ2	116 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	GTPBP2	Q9BX10	602 aa	Known RBP	13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	GPR174	Q9BXC1	333 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	NUF2	Q9BZD4	464 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	NMRAL1	Q9HBL8	299 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	VPS45	Q9NRW7	570 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	ARMCX1	Q9P291	453 aa		13.52	□□□□□ -0.25
DDR1-225	ENST00000376568	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	MAGEB16	A2A368	324 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	APOA4	P06727	396 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	DCN	P07585	359 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	OR56A5	P0C7T3	313 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ESRRA	P11474	423 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	CYP4F2	P78329	520 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	RING1	Q06587	406 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	TSTD2	Q5T7W7	516 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	FSTL4	Q6MZW2	842 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	POTEH	Q6S545	545 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ENPP7	Q6UWV6	458 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ADGRG2	Q8IZP9	1017 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	GFM2	Q969S9	779 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	IL36A	Q9UHA7	158 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ARHGAP26	Q9UNA1	814 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	BTRC	Q9Y297	605 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	OR1A2	Q9Y585	309 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	KDELR3	O43731	214 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	SERPINB4	P48594	390 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	IL2	P60568	153 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	CDK16	Q00536	496 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	USP4	Q13107	963 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	CAND1	Q86VP6	1230 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ARHGAP12	Q8IWW6	846 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	MAGED4	Q96JG8	741 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ACSS3	Q9H6R3	686 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ZDHHC7	Q9NXF8	308 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	GMEB2	Q9UKD1	530 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	SRC	P12931	536 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	IL1RL1	Q01638	556 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	LRRC49	Q8IUZ0	686 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	FBXO39	Q8N4B4	442 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	CENPI	Q92674	756 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	KLHL29	Q96CT2	875 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	FCRL5	Q96RD9	977 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	DZANK1	Q9NVP4	752 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	NCKIPSD	Q9NZQ3	722 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF711	Q9Y462	761 aa		13.51	□□□□□ -0.25
DDR1-225	ENST00000376568	FAM170B	A6NMN3	283 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	LDB2	O43679	373 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SDC3	O75056	442 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	HNF1B	P35680	557 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF234	Q14588	700 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	AP5B1	Q2VPB7	878 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	CCNJL	Q8IV13	435 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	LEMD2	Q8NC56	503 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF689	Q96CS4	500 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	FOXQ1	Q9C009	403 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	DRC3	Q9H069	523 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	LMAN1L	Q9HAT1	526 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	MID1IP1	Q9NPA3	183 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ZDHHC18	Q9NUE0	388 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	PTPRF	P10586	1907 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	NPEPPSL1	A6NEC2	478 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	C16orf96	A6NNT2	1141 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SMAP	O00193	183 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	AIM2	O14862	343 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	RASSF9	O75901	435 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	OAS1	P00973	400 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	LAMP2	P13473	410 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	HOXD9	P28356	352 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	PREP	P48147	710 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	GPX6	P59796	221 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	UAP1L1	Q3KQV9	507 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	OTUD1	Q5VV17	481 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SMYD5	Q6GMV2	418 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	POU5F2	Q8N7G0	328 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	FAM3C	Q92520	227 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	IL21	Q9HBE4	155 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	PCDH12	Q9NPG4	1184 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SPAST	Q9UBP0	616 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SPO11	Q9Y5K1	396 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SVIL	O95425	2214 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	IGLON5	A6NGN9	336 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568		H0Y858	1186 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	PRMT5	O14744	637 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SERPINB5	P36952	375 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ARCN1	P48444	511 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	AQP5	P55064	265 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	CLDN2	P57739	230 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	LAMB3	Q13751	1172 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ARMC6	Q6NXE6	501 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	CRTC1	Q6UUV9	634 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF761	Q86XN6	746 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	RAVER1	Q8IY67	606 aa	Known RBP	13.5	□□□□□ -0.25

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