RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FOXM1Q08050 763 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ADGRF2Q8IZF7 708 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 LPGAT1Q92604 370 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 COPS4Q9BT78 406 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 XPNPEP3Q9NQH7 507 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF182P17025 639 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 SP4Q02446 784 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PTPN20Q4JDL3 420 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TRPV4Q9HBA0 871 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PROS1P07225 676 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CYP4B1P13584 511 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 ITGA3P26006 1051 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NAGLUP54802 743 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PEA15Q15121 130 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 LBHQ53QV2 105 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 TPD52L3Q96J77 140 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CLCC1Q96S66 551 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MYMKA6NI61 221 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CALCAP01258 141 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 FCER2P06734 321 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CDK4P11802 303 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BRCC3P46736 316 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 DNASE1L3Q13609 305 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SGO1Q5FBB7 561 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ANKRD22Q5VYY1 191 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CCBE1Q6UXH8 406 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 COMMD7Q86VX2 200 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 STK40Q8N2I9 435 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 FBXO39Q8N4B4 442 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 OR5K1Q8NHB7 308 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 OR5B12Q96R08 314 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 AGO2Q9UKV8 859 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 ICKQ9UPZ9 632 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PCDHGB7Q9Y5F8 929 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SLC35F4A4IF30 521 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CAPZA1P52907 286 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ARPP19P56211 112 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NR6A1Q15406 480 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MALSU1Q96EH3 234 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF607Q96SK3 696 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PHF23Q9BUL5 403 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SMCO4Q9NRQ5 59 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 WWOXQ9NZC7 414 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ABCD2Q9UBJ2 740 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF639Q9UID6 485 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SYNJ2BP-COX16A0A087WUM0 186 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 KELP23276 732 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 RPL6Q02878 288 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TXN2Q99757 166 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TMEM184CQ9NVA4 438 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.61□□□□□ -1.351e-10■■■□□ 14.9
UBR4-204ENST00000375254 CHRM3P20309 590 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MYLK3Q32MK0 819 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TATDN1Q6P1N9 297 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF621Q6ZSS3 439 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PTAR1Q7Z6K3 402 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 SP110Q9HB58 689 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CRYL1Q9Y2S2 319 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 N6AMT1Q9Y5N5 214 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ADGRL3Q9HAR2 1447 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BORCS7-ASMTA0A0B4J1R7 106 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 EEF2KO00418 725 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 FCER1AP12319 257 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PEX2P28328 305 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 OR3A3P47888 321 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TRAM1Q15629 374 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF549Q6P9A3 640 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CHMP1BQ7LBR1 199 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 RETREG3Q86VR2 466 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 LGALS12Q96DT0 336 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MTMR8Q96EF0 704 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NT5DC2Q9H857 520 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PRMT8Q9NR22 394 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ASTN2O75129 1339 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 NCOA3Q9Y6Q9 1424 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 FSCN2O14926 492 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 AURKAO14965 403 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 FOXN1O15353 648 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 GALK2Q01415 458 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PCDH20Q8N6Y1 951 aaKnown RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 BEST4Q8NFU0 473 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 DNAJB14Q8TBM8 379 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 VRK1Q99986 396 aaPredicted RBP6.6□□□□□ -1.35
UBR4-204ENST00000375254 TJP2Q9UDY2 1190 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PPATQ06203 517 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 PSD2Q9BQI7 771 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 C19orf12Q9NSK7 152 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 NKIRAS2Q9NYR9 191 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ERVK-19Q9WJR5 959 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 UGT2A1Q9Y4X1 527 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 ST14Q9Y5Y6 855 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 APOC4-APOC2K7ER74 178 aa6.6□□□□□ -1.35
UBR4-204ENST00000375254 UPK1BO75841 260 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms